y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.012G109500.1 |
Family | AA1 |
Protein Properties | Length: 574 Molecular Weight: 63002.3 Isoelectric Point: 8.5271 |
Chromosome | Chromosome/Scaffold: 12 Start: 24671881 End: 24674895 |
Description | Laccase/Diphenol oxidase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 23 | 560 | 0 |
AAILEHSFYVKNLTVTRLCNRQVITAVNDSFPGPSLRVREGDKLIIHVVNMSPYKITIHWHGVSQLMSAWSDGPEMITQCAIRPGNNYTYKYRITKQEGT LFWHAHSSCLRATVHGAIIIHPRARHSYPFPKPYREVPILLGEWWNANVIDVENQALALGIGPNISNAYTINGWPGDLYPCSQNQMYKHRVEQGKTYLLR IINAAVNSHLFYKIANHNMTVVAVDARYTNPYVTDIVVISPGQTVDVLLTADQPVGSYYMTANNYASGSGTAVGVPFNPTTTRGVIIYQGARSSTKPLMP VVPAFNDTPTAHKFFTELTSLVGGPHWVPVPLNVDQKMFVTVGMGLDVCPPNVSCQGRPPVGAALSGNMNNVSFVQPTKLSLLQAFFFNVGGVYTTDFPA NPPVQFNFTNPSINADLPLLFAPKRTSITKVKFNSTVEMVLQNTALIGAENHPMHLHGFDFHVLAQGFGNFNPATDTLKYNLFNPQMRNTVSVPVAGWAV IRFVANNPGAWFMHCHFEGHNSVGLSTAFIVENGPTPE |
Full Sequence |
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Protein Sequence Length: 574 Download |
MGRLVFLFAS SLLLMVAATT VSAAILEHSF YVKNLTVTRL CNRQVITAVN DSFPGPSLRV 60 REGDKLIIHV VNMSPYKITI HWHGVSQLMS AWSDGPEMIT QCAIRPGNNY TYKYRITKQE 120 GTLFWHAHSS CLRATVHGAI IIHPRARHSY PFPKPYREVP ILLGEWWNAN VIDVENQALA 180 LGIGPNISNA YTINGWPGDL YPCSQNQMYK HRVEQGKTYL LRIINAAVNS HLFYKIANHN 240 MTVVAVDARY TNPYVTDIVV ISPGQTVDVL LTADQPVGSY YMTANNYASG SGTAVGVPFN 300 PTTTRGVIIY QGARSSTKPL MPVVPAFNDT PTAHKFFTEL TSLVGGPHWV PVPLNVDQKM 360 FVTVGMGLDV CPPNVSCQGR PPVGAALSGN MNNVSFVQPT KLSLLQAFFF NVGGVYTTDF 420 PANPPVQFNF TNPSINADLP LLFAPKRTSI TKVKFNSTVE MVLQNTALIG AENHPMHLHG 480 FDFHVLAQGF GNFNPATDTL KYNLFNPQMR NTVSVPVAGW AVIRFVANNP GAWFMHCHFE 540 GHNSVGLSTA FIVENGPTPE TTLPPPPPDL PEC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 1.0e-41 | 32 | 146 | 117 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 1.0e-68 | 12 | 552 | 581 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 2.0e-73 | 5 | 551 | 583 | + oxidoreductase | ||
TIGR03388 | ascorbase | 2.0e-86 | 25 | 551 | 560 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 23 | 556 | 535 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002276415.1 | 0 | 18 | 573 | 17 | 565 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308196.1 | 0 | 1 | 573 | 1 | 562 | laccase 110a [Populus trichocarpa] |
RefSeq | XP_002322939.1 | 0 | 18 | 573 | 17 | 569 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333273.1 | 0 | 18 | 573 | 17 | 568 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527888.1 | 0 | 30 | 573 | 2 | 540 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 26 | 551 | 10 | 521 | I Chain I, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+- Activated St |
PDB | 1asq_A | 0 | 26 | 551 | 10 | 521 | I Chain I, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+- Activated St |
PDB | 1asp_B | 0 | 26 | 551 | 10 | 521 | I Chain I, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+- Activated St |
PDB | 1asp_A | 0 | 26 | 551 | 10 | 521 | I Chain I, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+- Activated St |
PDB | 1aso_B | 0 | 26 | 551 | 10 | 521 | I Chain I, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+- Activated St |