y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.012G109900.1 |
Family | AA1 |
Protein Properties | Length: 582 Molecular Weight: 63895.5 Isoelectric Point: 8.7389 |
Chromosome | Chromosome/Scaffold: 12 Start: 24927411 End: 24930793 |
Description | laccase 7 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 34 | 568 | 0 |
AAIVEHSFNVQNLTVNRLCNRHVITAANGRLPGPSIRAREGDTLIIHVFNKSPYNLTIHWHGIHQMLSAWADGPDMITQCPIRPGNKYTYKFKIIKQEGT FWWHSHTSTLRATLYGAIIIRPRAGSSYPFPKPYREVPILLGEWWNGNVVDMANQALAHGTGPNISDAYTINGWPGDLYPCSQNQMYKLKVKQGKTYLLR ITNAAVDNNLFYKIANHKMIVVAVDARYTNPYVTDVLVVASGQTIDVLLTADQPIGSYYMAARAYASAAGLEFDSTTTRGVIVYEGAPSWTSRTPLMPVL PAFNDTPTAHKFSTSLTALVGGPHWEPVPLKVDHKMFVTIGMALDVCPSNTTCQGPPVGAKLSASMNNVSFVPPSSLSLLQAFFFNVRGVYTTDFPVKPP AQFDYTNPSINGDLPLLYAPKGTRITKLKFNTTVEMVMQNTAIIGAENHPMHLHGFDFHVLAQGFGNFNPATDTLKYNLFNPQIRHTIGVPVGGWAVIRF VANNPGVWFMHCHFDGHLPIGLATAFVVENGPTPE |
Full Sequence |
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Protein Sequence Length: 582 Download |
MTSPSVIYSI EMGRLVFLFA SSLLLMVAAT TVSAAIVEHS FNVQNLTVNR LCNRHVITAA 60 NGRLPGPSIR AREGDTLIIH VFNKSPYNLT IHWHGIHQML SAWADGPDMI TQCPIRPGNK 120 YTYKFKIIKQ EGTFWWHSHT STLRATLYGA IIIRPRAGSS YPFPKPYREV PILLGEWWNG 180 NVVDMANQAL AHGTGPNISD AYTINGWPGD LYPCSQNQMY KLKVKQGKTY LLRITNAAVD 240 NNLFYKIANH KMIVVAVDAR YTNPYVTDVL VVASGQTIDV LLTADQPIGS YYMAARAYAS 300 AAGLEFDSTT TRGVIVYEGA PSWTSRTPLM PVLPAFNDTP TAHKFSTSLT ALVGGPHWEP 360 VPLKVDHKMF VTIGMALDVC PSNTTCQGPP VGAKLSASMN NVSFVPPSSL SLLQAFFFNV 420 RGVYTTDFPV KPPAQFDYTN PSINGDLPLL YAPKGTRITK LKFNTTVEMV MQNTAIIGAE 480 NHPMHLHGFD FHVLAQGFGN FNPATDTLKY NLFNPQIRHT IGVPVGGWAV IRFVANNPGV 540 WFMHCHFDGH LPIGLATAFV VENGPTPETT LPPPPVDLPQ C* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 7.0e-48 | 42 | 158 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02604 | PLN02604 | 2.0e-75 | 52 | 559 | 531 | + oxidoreductase | ||
PLN02191 | PLN02191 | 8.0e-77 | 23 | 560 | 568 | + L-ascorbate oxidase | ||
TIGR03388 | ascorbase | 7.0e-93 | 36 | 559 | 550 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 34 | 581 | 550 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002276415.1 | 0 | 29 | 581 | 17 | 565 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308196.1 | 0 | 12 | 581 | 1 | 562 | laccase 110a [Populus trichocarpa] |
RefSeq | XP_002322939.1 | 0 | 29 | 581 | 17 | 569 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333273.1 | 0 | 29 | 581 | 17 | 568 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527888.1 | 0 | 41 | 581 | 2 | 540 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 52 | 559 | 19 | 521 | A Chain A, Bacillus Subtilis Pectate Lyase |
PDB | 1asq_A | 0 | 52 | 559 | 19 | 521 | A Chain A, Bacillus Subtilis Pectate Lyase |
PDB | 1asp_B | 0 | 52 | 559 | 19 | 521 | A Chain A, Bacillus Subtilis Pectate Lyase |
PDB | 1asp_A | 0 | 52 | 559 | 19 | 521 | A Chain A, Bacillus Subtilis Pectate Lyase |
PDB | 1aso_B | 0 | 52 | 559 | 19 | 521 | A Chain A, Bacillus Subtilis Pectate Lyase |