Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.012G140300.1 |
Family | GH3 |
Protein Properties | Length: 777 Molecular Weight: 84641 Isoelectric Point: 8.8532 |
Chromosome | Chromosome/Scaffold: 12 Start: 31374886 End: 31380428 |
Description | beta-D-xylosidase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 86 | 336 | 0 |
NISRLGIPKYEWWSEALHGVSNVGPGTNFSSLVPGATSFPQVILTAASFNTSLFEAIGKVVSTEARAMYNVGLAGLTFWSPNVNIFRDPRWGRGQETPGE DPLLSSKYGSSYVKGLQQTDDNADPSRLKVAACCKHYTAYDLDNWKGVDRYHFNAVVTQQDMDDTFDPPFKSCVIDGNVASVMCSYNQVNGKPTCADPHL LAGVIRGQWKLNGYIVSDCDSVEVFFDDQHYTKTPEQAAAKAILAGLDLNC |
Full Sequence |
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Protein Sequence Length: 777 Download |
MISVFENRAP KVFFILGFLI CFSLISVRVV GQVSPAVFAC DATKDRKVVH YGFCNASLGR 60 DARVADLVRR LTLQEKILNI VNGAGNISRL GIPKYEWWSE ALHGVSNVGP GTNFSSLVPG 120 ATSFPQVILT AASFNTSLFE AIGKVVSTEA RAMYNVGLAG LTFWSPNVNI FRDPRWGRGQ 180 ETPGEDPLLS SKYGSSYVKG LQQTDDNADP SRLKVAACCK HYTAYDLDNW KGVDRYHFNA 240 VVTQQDMDDT FDPPFKSCVI DGNVASVMCS YNQVNGKPTC ADPHLLAGVI RGQWKLNGYI 300 VSDCDSVEVF FDDQHYTKTP EQAAAKAILA GLDLNCGSFL GQHTAAAVKK GLLKESDIDN 360 AITNNFATLM RLGFFDGDPR KQPYGKLGPK DVCTAENQEL ARDAARQGIV LLKNTAGSLP 420 LSSAAIKTLA VIGPNANVTK TMIGNYEGIP CKYTTPLQGL TASVATKYLP GCSNVTCGNA 480 QVKEAKKLAA TADATVLVMG IDQSLERESF DRVDLRLPGQ QPLLIKEVAK VAKGPVILVI 540 MSGGGFDISF AKHNDKVTSI LWVGYPGEAG GAAIADVIFG YYNPSGRLPM TWYPQSYLDK 600 VPMTNMNMRP DPPKGYPGRT YRFYTGETIY SFGHGLSYSK FSHKIVKAPQ TVSIPLDDDH 660 VCRHSLDCNS VEAVEQLCKK SVTFDIHLRV QNKARHGGSH SVLLFVTPPS VHNSPRKHLI 720 GFEKISLKGK SGTLMRFKVD VCKDLSVVDE LGRRKIALGQ YVLHVGNFKH TLSLRI* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-59 | 409 | 639 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 3.0e-59 | 87 | 473 | 393 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 5.0e-65 | 75 | 364 | 294 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 1.0e-83 | 60 | 741 | 766 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 16 | 776 | 777 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI39114.1 | 0 | 1 | 776 | 1 | 774 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264183.1 | 0 | 1 | 776 | 192 | 966 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002268626.1 | 0 | 30 | 776 | 26 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002303181.1 | 0 | 6 | 776 | 7 | 773 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513707.1 | 0 | 1 | 776 | 1 | 777 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 122 | 766 | 91 | 722 | A Chain A, Crystal Structure Of L-serine-o-acetyltransferase Found In D- Cycloserine Biosynthetic Pathway |
PDB | 3u48_A | 0 | 122 | 766 | 91 | 722 | A Chain A, Crystal Structure Of L-serine-o-acetyltransferase Found In D- Cycloserine Biosynthetic Pathway |
PDB | 3u4a_B | 0 | 122 | 766 | 91 | 722 | A Chain A, Crystal Structure Of L-serine-o-acetyltransferase Found In D- Cycloserine Biosynthetic Pathway |
PDB | 3u4a_A | 0 | 122 | 766 | 91 | 722 | A Chain A, Crystal Structure Of L-serine-o-acetyltransferase Found In D- Cycloserine Biosynthetic Pathway |
PDB | 2x41_A | 2e-36 | 63 | 643 | 3 | 605 | A Chain A, Crystal Structure Of L-serine-o-acetyltransferase Found In D- Cycloserine Biosynthetic Pathway |