Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.012G147500.1 |
Family | GH3 |
Protein Properties | Length: 789 Molecular Weight: 86071.1 Isoelectric Point: 6.5061 |
Chromosome | Chromosome/Scaffold: 12 Start: 32159959 End: 32163455 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 76 | 324 | 0 |
GIPRLGVPAYQWWSEALHGVSDLGPGTRFNATVPGATSFPAVILSAASFNEMLWLEMGRVVSTEARAMYNVGLAGLTYWSPNVNVFRDPRWGRGQETPGE DPTVVSKYAVNYVRGLQEVGSVGDKLKVSSCCKHYTAYDVDNWKGVDRFHFDAKVTKQDLEDTYQPPFKSCVVEGHVSSVMCSYNRVNGIPTCADPDLLK GIVRGQWGLDGYIVSDCDSIEVYYNAIHYTATPEDAVALALKAGLNMNC |
Full Sequence |
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Protein Sequence Length: 789 Download |
MKLKTQFSFA LCLSFFLVLV PYNTQAQPFA CDKNDPNTSK FPFCDTTLSY QDRTKDLVSR 60 LTLQEKVQQL VNTASGIPRL GVPAYQWWSE ALHGVSDLGP GTRFNATVPG ATSFPAVILS 120 AASFNEMLWL EMGRVVSTEA RAMYNVGLAG LTYWSPNVNV FRDPRWGRGQ ETPGEDPTVV 180 SKYAVNYVRG LQEVGSVGDK LKVSSCCKHY TAYDVDNWKG VDRFHFDAKV TKQDLEDTYQ 240 PPFKSCVVEG HVSSVMCSYN RVNGIPTCAD PDLLKGIVRG QWGLDGYIVS DCDSIEVYYN 300 AIHYTATPED AVALALKAGL NMNCGDYLGK YTVNAVNLKK VEESVVDQAL IYNYIVLMRL 360 GFFDGNPKQL LFGNLGPSDV CTDDHQKLAL DAAKQGIVLL DNDGVLPLSR TIIKSLAVIG 420 PNANATKVMI SNYAGVPCQY TTPLQGLQKY VSMVTHEAGC RDVKCNNDTF IDLAVQAAAN 480 TDAVVLVVGL DQSIEAEGLD RVNLTLPGYQ EKLVTDVANA ANGKVVLVVM AAGPIDITFA 540 RNMRKIGAIL WVGYPGQAGG DAIAQVIFGD HNPAGRSPFT WYPQEYANKV PMTDMNMRAN 600 ATTNFPGRTY RFYTGKTLYE FGHGLSYTSF SKFIISAPST VLINSTPNNI LLEPYSNNGE 660 AIDASSVSNC DDLQFNLMIG VKNNGPMDGD HVVLLFWKPP STKGVTGAPN MQLIGFERVG 720 VKKGKTKNVT VSLNVCKDLS LVDVEGKRKL VIGQHTIFVG TTSEHQVRHH FVVRQAGDES 780 GEPLVSIT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 5.0e-56 | 74 | 447 | 382 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-62 | 397 | 628 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 4.0e-65 | 62 | 349 | 318 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 5.0e-74 | 112 | 763 | 697 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 3 | 767 | 782 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB02547.1 | 0 | 15 | 780 | 12 | 778 | beta-1,4-xylosidase [Arabidopsis thaliana] |
EMBL | CAN82161.1 | 0 | 11 | 776 | 7 | 787 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_188596.1 | 0 | 15 | 780 | 12 | 778 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002264114.1 | 0 | 11 | 779 | 31 | 814 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002527511.1 | 0 | 26 | 780 | 22 | 789 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 112 | 764 | 91 | 726 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
PDB | 3u48_A | 0 | 112 | 764 | 91 | 726 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
PDB | 3u4a_B | 0 | 112 | 764 | 91 | 726 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
PDB | 3u4a_A | 0 | 112 | 764 | 91 | 726 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
PDB | 2x41_A | 1e-38 | 52 | 765 | 2 | 704 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |