Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.013G017200.1 |
Family | GT4 |
Protein Properties | Length: 463 Molecular Weight: 52519.6 Isoelectric Point: 9.1824 |
Chromosome | Chromosome/Scaffold: 13 Start: 1175575 End: 1178917 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 267 | 424 | 1.2e-25 |
ETPKIISVAQFRPEKAHSLQLEAFSVVIKKLDEHYRRPKLQFVGSCRNKSDEERLQNLKDKAVQLNIQDDVEFHKNVMYRDLVSLLGGAVAGIHSMIDEH FGISVVEYMAAGAIPIAHNSAGPKMDIVLDEDRQQTGFLAQNVEEYADAVLKIVKMPE |
Full Sequence |
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Protein Sequence Length: 463 Download |
MLNWILCWSL ITLTLATILL LASQILNHRR NKKRAVGFFH PYTNDGGGGE RVLWCAVKAI 60 QEQNPDLDSV IFSGDNDASS QSLMSRATDR FGVHLLYPPK VVHLNRRKWI EETTYPHFTM 120 IGQSLGSVYL SWEALNKFTP LYYFDTSGYA FTYPIARLFG CKVICYTHYP TISLDMVSRV 180 RQRSSMYNND AVIAKSTWLS RCKIIYYTVF SVMYGMVGSC AHLVMVNSSW TQSHIEKLWG 240 IPKRIKRVYP PCDTSGLQAL PLERSVETPK IISVAQFRPE KAHSLQLEAF SVVIKKLDEH 300 YRRPKLQFVG SCRNKSDEER LQNLKDKAVQ LNIQDDVEFH KNVMYRDLVS LLGGAVAGIH 360 SMIDEHFGIS VVEYMAAGAI PIAHNSAGPK MDIVLDEDRQ QTGFLAQNVE EYADAVLKIV 420 KMPESERLKI ATAARRRASR FSEQRFYDDL KAAIRPIICG SS* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
COG0438 | RfaG | 1.0e-21 | 219 | 458 | 244 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] |
cd03801 | GT1_YqgM_like | 8.0e-22 | 221 | 424 | 213 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. |
pfam00534 | Glycos_transf_1 | 1.0e-23 | 267 | 427 | 163 | + Glycosyl transferases group 1. Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. |
PLN02949 | PLN02949 | 0 | 1 | 458 | 458 | + transferase, transferring glycosyl groups |
cd03806 | GT1_ALG11_like | 0 | 34 | 449 | 419 | + This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY86782.1 | 0 | 25 | 461 | 25 | 461 | glycosyl transferase family 1 protein [Noccaea caerulescens] |
GenBank | ABA99697.1 | 0 | 35 | 461 | 31 | 457 | glycosyl transferase, group 1 family protein, expressed [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_181548.2 | 0 | 27 | 460 | 27 | 460 | glycosyl transferase family 1 protein [Arabidopsis thaliana] |
RefSeq | XP_002318120.1 | 0 | 22 | 458 | 25 | 461 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528312.1 | 0 | 23 | 462 | 25 | 464 | glycosyl transferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2f9f_A | 0.00000001 | 272 | 441 | 27 | 177 | A Chain A, Crystal Structure Of The Putative Mannosyl Transferase (Wbaz-1)from Archaeoglobus Fulgidus, Northeast Structural Genomics Target Gr29a |
PDB | 2bfw_A | 0.0007 | 365 | 442 | 126 | 200 | A Chain A, Structure Of The C Domain Of Glycogen Synthase From Pyrococcus Abyssi |
PDB | 2bis_C | 0.002 | 365 | 445 | 342 | 419 | A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi |
PDB | 2bis_B | 0.002 | 365 | 445 | 342 | 419 | A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi |
PDB | 2bis_A | 0.002 | 365 | 445 | 342 | 419 | A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi |