Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.013G025500.1 |
Family | AA1 |
Protein Properties | Length: 577 Molecular Weight: 63462.9 Isoelectric Point: 8.8105 |
Chromosome | Chromosome/Scaffold: 13 Start: 1912142 End: 1914762 |
Description | laccase 17 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 31 | 562 | 0 |
TRHYKFDVKLHNVTRLCHTRSIVSVNGQFPGPRIVAREGDQLLIKVVNHVPNNVSIHWHGIRQLQSGWADGPAYVTQCPIQTGQSYVYNFTIIGQRGTLF WHAHISWLRATLYGPIIILHKRGIPYPFAKPYKEVPIVFGEWFNSDPEAVISQALQTGGGPNVSDAYTINGLPGPLYTCSAKDTFKLKVKPGKTYLLRLV NAALNDELFFSIANHTLTVVDVDAVYVKPFKTETLLITPGQTTNVILKTKPSYPNATFFMTARPYVTGQGTFDNSTVAGILEYESPPNSLHSSIMLPLFK PILPALNDTSFATKFGSKLRSLASAQYPANVPQKVDKHFFFTVGLGTSPCQHNQTCQGPNGTKFAASVNNVSFAMPTSALLQAHFFGQFNGVYTPDFPST PITPFNYTGSPPNNTTVSNGTKVVVLPFNTSVELVMQDTSILGAESHPLHLHGFNFFIVGQGFGNFDPNKDPAKFNLIDPVERNTVGVPSGGWVAIRFLA DNPGVWFMHCHLEVHTSWGLKMAWIVLDGELP |
Full Sequence |
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Protein Sequence Length: 577 Download |
MGVFLLSSPA FLVFFSFFTF CLLVDPVFGI TRHYKFDVKL HNVTRLCHTR SIVSVNGQFP 60 GPRIVAREGD QLLIKVVNHV PNNVSIHWHG IRQLQSGWAD GPAYVTQCPI QTGQSYVYNF 120 TIIGQRGTLF WHAHISWLRA TLYGPIIILH KRGIPYPFAK PYKEVPIVFG EWFNSDPEAV 180 ISQALQTGGG PNVSDAYTIN GLPGPLYTCS AKDTFKLKVK PGKTYLLRLV NAALNDELFF 240 SIANHTLTVV DVDAVYVKPF KTETLLITPG QTTNVILKTK PSYPNATFFM TARPYVTGQG 300 TFDNSTVAGI LEYESPPNSL HSSIMLPLFK PILPALNDTS FATKFGSKLR SLASAQYPAN 360 VPQKVDKHFF FTVGLGTSPC QHNQTCQGPN GTKFAASVNN VSFAMPTSAL LQAHFFGQFN 420 GVYTPDFPST PITPFNYTGS PPNNTTVSNG TKVVVLPFNT SVELVMQDTS ILGAESHPLH 480 LHGFNFFIVG QGFGNFDPNK DPAKFNLIDP VERNTVGVPS GGWVAIRFLA DNPGVWFMHC 540 HLEVHTSWGL KMAWIVLDGE LPTQKLLPPP ADLPKC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02168 | PLN02168 | 4.0e-51 | 28 | 536 | 513 | + copper ion binding / pectinesterase | ||
PLN02191 | PLN02191 | 1.0e-72 | 32 | 555 | 553 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 1.0e-82 | 31 | 563 | 568 | + oxidoreductase | ||
TIGR03388 | ascorbase | 2.0e-95 | 31 | 566 | 572 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 29 | 576 | 549 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI16224.1 | 0 | 1 | 576 | 1 | 585 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002284473.1 | 0 | 1 | 576 | 1 | 585 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299296.1 | 0 | 1 | 576 | 1 | 581 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002300066.1 | 0 | 1 | 576 | 1 | 580 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531824.1 | 0 | 4 | 576 | 5 | 576 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 32 | 566 | 4 | 536 | H Chain H, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome |
PDB | 1asq_A | 0 | 32 | 566 | 4 | 536 | H Chain H, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome |
PDB | 1asp_B | 0 | 32 | 566 | 4 | 536 | H Chain H, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome |
PDB | 1asp_A | 0 | 32 | 566 | 4 | 536 | H Chain H, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome |
PDB | 1aso_B | 0 | 32 | 566 | 4 | 536 | H Chain H, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome |