Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.013G063700.2 |
Family | GT8 |
Protein Properties | Length: 644 Molecular Weight: 75145.6 Isoelectric Point: 9.1633 |
Chromosome | Chromosome/Scaffold: 13 Start: 7098252 End: 7102442 |
Description | galacturonosyltransferase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 302 | 616 | 0 |
CLPLQLAADYYFHGYQSKKDLNIEKLEDPSLYHYAIFSDNVLATSVVVNSTVLHANEPEKHVFHIVTDKLNFAAMRMWFILNAPEKATVQVENIDDFKWL NSSYCSVLRQLESARVKEYYFKNHPSSLFVGSDNLKYRNPKYLSMLNHLRFYLPEVYPKLHKILFLDDDIVVQKDLTPLWDVDLNGMVNGAVETCKGSFH RFDKYLNFSNPKISENFDSNACGWAFGMNIFDLKEWRNRNITQIYHYWQDRNEDRTLWKLGTLPPGLITFYNLTYPLDRKWHVLGLGYDPALNQTEIVNA AVVHYNGNYKPWLDL |
Full Sequence |
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Protein Sequence Length: 644 Download |
MQKYQIAKRL EEDSKHMGNC LTERNWQRPL LLYFSMTMRS DASGTIRTSR VKMKDLSASW 60 VLENPISGDP GKQKGSQVFK LKDSYQASRR SEENVEHFID DHHWQEDEIQ NRRKASWSPV 120 KFKRQMLRQK RWDLRTVDLI RQNKEADKQM EATSAIEDLK NMDPVVNGKY SIWRRDFENP 180 NSDSTLKLMR DQIIMAKAYA NIAKSRNQID LYSSLLRHVG DSLRVIGDAN SDSELHPSSL 240 DQAKAMGHAL SFAKDRLYDC HIVARKLRAM LQSAEDNVDS LKKRSAFLIQ LAAKTVPKPL 300 HCLPLQLAAD YYFHGYQSKK DLNIEKLEDP SLYHYAIFSD NVLATSVVVN STVLHANEPE 360 KHVFHIVTDK LNFAAMRMWF ILNAPEKATV QVENIDDFKW LNSSYCSVLR QLESARVKEY 420 YFKNHPSSLF VGSDNLKYRN PKYLSMLNHL RFYLPEVYPK LHKILFLDDD IVVQKDLTPL 480 WDVDLNGMVN GAVETCKGSF HRFDKYLNFS NPKISENFDS NACGWAFGMN IFDLKEWRNR 540 NITQIYHYWQ DRNEDRTLWK LGTLPPGLIT FYNLTYPLDR KWHVLGLGYD PALNQTEIVN 600 AAVVHYNGNY KPWLDLAVAK YKSYWSKYVR FDNYYLKLCN LSE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02718 | PLN02718 | 1.0e-167 | 182 | 643 | 465 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 0 | 40 | 643 | 605 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 183 | 641 | 460 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 181 | 642 | 469 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 0 | 180 | 640 | 482 | + galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB37483.1 | 0 | 40 | 643 | 52 | 658 | putative protein [Arabidopsis thaliana] |
RefSeq | NP_195540.2 | 0 | 40 | 643 | 74 | 680 | GAUT3 (Galacturonosyltransferase 3); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
Swiss-Prot | Q0WQD2 | 0 | 40 | 643 | 74 | 680 | GAUT3_ARATH RecName: Full=Probable galacturonosyltransferase 3 |
RefSeq | XP_002328269.1 | 0 | 40 | 643 | 52 | 654 | glycosyltransferase, family GT8 [Populus trichocarpa] |
RefSeq | XP_002533896.1 | 0 | 17 | 643 | 32 | 642 | Glycosyltransferase QUASIMODO1, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.000006 | 440 | 613 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.000006 | 440 | 613 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.00002 | 440 | 613 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO782208 | 318 | 325 | 641 | 0 |
HO795725 | 456 | 189 | 644 | 0 |
FG612224 | 298 | 342 | 638 | 0 |
GO842648 | 321 | 325 | 644 | 0 |
HO462088 | 397 | 249 | 644 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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