Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.013G075700.1 |
Family | GH5 |
Protein Properties | Length: 428 Molecular Weight: 48469 Isoelectric Point: 6.6022 |
Chromosome | Chromosome/Scaffold: 13 Start: 9265631 End: 9269082 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 51 | 376 | 3.3e-34 |
DGKPLYVNGWNSYWLMAHSMDENSRGRVSVMLQAGAKMGLTVCRTWAFNDGGYEALQISPGQFDERVFQALDYVIAEASRHGIRLLLSLVNNLQAYGGKT QYVKWAWQEGIGLSSSNDSFFFDPSIRKYFKNYVLTVLTRKNTITGIEYRNDPTIFAWELINEPRCMSDPSGDTLQEWIEEMTGFIKSIDKNHLLTIGLE GFYGPKSPKSAVNPGEWASTLGSDFVRNSNITNVDFTSVHIYPDHWFHDLGFEEKQRYVSKWVRSHIEDCDKELKKPVMFTEYGLSNQNKDFQASQREQF YRTILDIIYKSAKKKGSGVGALVWQF |
Full Sequence |
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Protein Sequence Length: 428 Download |
MGGNGVLYPI LGFATCVAFI YMSFGDLKLS SLPKGLSLSF VERNGSHFIL DGKPLYVNGW 60 NSYWLMAHSM DENSRGRVSV MLQAGAKMGL TVCRTWAFND GGYEALQISP GQFDERVFQA 120 LDYVIAEASR HGIRLLLSLV NNLQAYGGKT QYVKWAWQEG IGLSSSNDSF FFDPSIRKYF 180 KNYVLTVLTR KNTITGIEYR NDPTIFAWEL INEPRCMSDP SGDTLQEWIE EMTGFIKSID 240 KNHLLTIGLE GFYGPKSPKS AVNPGEWAST LGSDFVRNSN ITNVDFTSVH IYPDHWFHDL 300 GFEEKQRYVS KWVRSHIEDC DKELKKPVMF TEYGLSNQNK DFQASQREQF YRTILDIIYK 360 SAKKKGSGVG ALVWQFLVEG IEEYNDDFGL VPWETPSIHK LTIQQSCRLA IIQGLNQQTG 420 NLKQLCS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam11790 | Glyco_hydro_cc | 0.002 | 212 | 356 | 152 | + Glycosyl hydrolase catalytic core. This family is probably a glycosyl hydrolase, and is conserved in fungi and some Proteobacteria. The pombe member is annotated as being from IPR013781. | ||
pfam12876 | Cellulase-like | 0.0001 | 198 | 292 | 104 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
pfam00150 | Cellulase | 4.0e-6 | 201 | 350 | 152 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 3.0e-25 | 113 | 391 | 289 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95966.1 | 0 | 1 | 426 | 5 | 431 | unknown [Populus trichocarpa] |
GenBank | ACN78665.1 | 0 | 1 | 427 | 14 | 440 | endo-beta-mannanase [Malus x domestica] |
EMBL | CBI21857.1 | 0 | 1 | 427 | 2 | 429 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_179660.2 | 0 | 3 | 427 | 6 | 430 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
RefSeq | XP_002330687.1 | 0 | 1 | 426 | 5 | 431 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 39 | 410 | 5 | 370 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 45 | 392 | 18 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 45 | 392 | 18 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 45 | 392 | 18 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 45 | 392 | 18 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |