| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.013G114800.2 |
| Family | GH3 |
| Protein Properties | Length: 628 Molecular Weight: 68960.2 Isoelectric Point: 7.7469 |
| Chromosome | Chromosome/Scaffold: 13 Start: 28433119 End: 28436604 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 105 | 339 | 0 |
| ATRMQIPMIYGIDAVHGNNNVYKATIFPHNIGLGATRDPKLVKKIGAATALESRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPHLVDAMTEIVPGLQG DMPAKSSKGVPFVAGNKNVAACAKHYVGDGGTTKGINENNTVINWHDLLSIHMPGYYTSIIKGVSTVMVSYSSWNGVKMHANRDLVTGFLKNKLRFRGFV ISDWEGIDRITYPPHANYTYSIQAAIGSGIDMVMV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 628 Download |
| MARTRITIFF MGLVLWCCLT KAEYMKYKDP KQAVHVRTRD LLDRMTLEEK IGQMVQIERS 60 VASADVMNKY FIGSVLSGGG SAPSPQASPE AWINMINDFQ KGSLATRMQI PMIYGIDAVH 120 GNNNVYKATI FPHNIGLGAT RDPKLVKKIG AATALESRAT GIPYVFAPCI AVCRDPRWGR 180 CYESYSEDPH LVDAMTEIVP GLQGDMPAKS SKGVPFVAGN KNVAACAKHY VGDGGTTKGI 240 NENNTVINWH DLLSIHMPGY YTSIIKGVST VMVSYSSWNG VKMHANRDLV TGFLKNKLRF 300 RGFVISDWEG IDRITYPPHA NYTYSIQAAI GSGIDMVMVP YDYSSFIDGL TFLVKNNFIP 360 MSRIDDAVKR ILRVKFAVGL FENPLADNSL VDQLGRQEHR ELAREAVRRS LVLLKNGHYA 420 DQPLLPLPKK TSKILVAGSH ADNLGYQCGG WTIEWQGFSG NDLTNGTTVL TAIKNTVDSS 480 TNVVYEENPD PKFVKSNNFS CAIVVVGEHP YVETKGDSMN LTIPEPGPTT IRNVCGALKC 540 VVILMSGRPV VIEPDIDSMD ALVAAWLPGS EGQGVADVLF GDYGFSGKLP RTWFKTVDQL 600 PMNVGDPHYD PLFPFGFGLT TEPTKAY* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN03080 | PLN03080 | 3.0e-41 | 125 | 603 | 530 | + Probable beta-xylosidase; Provisional |
| pfam01915 | Glyco_hydro_3_C | 1.0e-53 | 411 | 620 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
| PRK15098 | PRK15098 | 2.0e-81 | 40 | 620 | 656 | + beta-D-glucoside glucohydrolase; Provisional |
| COG1472 | BglX | 3.0e-84 | 45 | 453 | 416 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
| pfam00933 | Glyco_hydro_3 | 4.0e-88 | 46 | 374 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAZ15705.1 | 0 | 1 | 627 | 1 | 627 | endo-alpha-1,4-glucanase [Gossypium hirsutum] |
| GenBank | ABK95015.1 | 0 | 5 | 625 | 3 | 624 | unknown [Populus trichocarpa] |
| RefSeq | XP_002319151.1 | 0 | 25 | 625 | 1 | 601 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002325849.1 | 0 | 11 | 625 | 1 | 611 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525724.1 | 0 | 5 | 626 | 3 | 625 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1j8v_A | 0 | 23 | 627 | 1 | 605 | A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi |
| PDB | 1iex_A | 0 | 23 | 627 | 1 | 605 | A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi |
| PDB | 1iew_A | 0 | 23 | 627 | 1 | 605 | A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi |
| PDB | 1iev_A | 0 | 23 | 627 | 1 | 605 | A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi |
| PDB | 1ieq_A | 0 | 23 | 627 | 1 | 605 | A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi |
