Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.013G114800.5 |
Family | GH3 |
Protein Properties | Length: 503 Molecular Weight: 55642.2 Isoelectric Point: 9.1929 |
Chromosome | Chromosome/Scaffold: 13 Start: 28433119 End: 28436604 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 105 | 339 | 0 |
ATRMQIPMIYGIDAVHGNNNVYKATIFPHNIGLGATRDPKLVKKIGAATALESRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPHLVDAMTEIVPGLQG DMPAKSSKGVPFVAGNKNVAACAKHYVGDGGTTKGINENNTVINWHDLLSIHMPGYYTSIIKGVSTVMVSYSSWNGVKMHANRDLVTGFLKNKLRFRGFV ISDWEGIDRITYPPHANYTYSIQAAIGSGIDMVMV |
Full Sequence |
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Protein Sequence Length: 503 Download |
MARTRITIFF MGLVLWCCLT KAEYMKYKDP KQAVHVRTRD LLDRMTLEEK IGQMVQIERS 60 VASADVMNKY FIGSVLSGGG SAPSPQASPE AWINMINDFQ KGSLATRMQI PMIYGIDAVH 120 GNNNVYKATI FPHNIGLGAT RDPKLVKKIG AATALESRAT GIPYVFAPCI AVCRDPRWGR 180 CYESYSEDPH LVDAMTEIVP GLQGDMPAKS SKGVPFVAGN KNVAACAKHY VGDGGTTKGI 240 NENNTVINWH DLLSIHMPGY YTSIIKGVST VMVSYSSWNG VKMHANRDLV TGFLKNKLRF 300 RGFVISDWEG IDRITYPPHA NYTYSIQAAI GSGIDMVMVP YDYSSFIDGL TFLVKNNFIP 360 MSRIDDAVKR ILRVKFAVGL FENPLADNSL VDQLGRQEHR ELAREAVRRS LVLLKNGHYA 420 DQPLLPLPKK TSKILVAGSH ADNLGYQCGG WTIEWQGFSG NDLTNGKTNN LLPCFSVFNY 480 VVPTLVCISH FPICKQPSRL SL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-8 | 411 | 452 | 42 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PLN03080 | PLN03080 | 6.0e-33 | 125 | 452 | 361 | + Probable beta-xylosidase; Provisional | ||
PRK15098 | PRK15098 | 4.0e-58 | 40 | 442 | 420 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 2.0e-86 | 45 | 453 | 416 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-90 | 46 | 374 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAZ15705.1 | 0 | 1 | 468 | 1 | 468 | endo-alpha-1,4-glucanase [Gossypium hirsutum] |
GenBank | ABK95015.1 | 0 | 5 | 468 | 3 | 467 | unknown [Populus trichocarpa] |
RefSeq | XP_002278363.1 | 0 | 10 | 468 | 11 | 469 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002278377.1 | 0 | 10 | 471 | 11 | 472 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
RefSeq | XP_002525724.1 | 0 | 5 | 468 | 3 | 467 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 23 | 460 | 1 | 439 | A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi |
PDB | 1x38_A | 0 | 23 | 460 | 1 | 439 | A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi |
PDB | 1lq2_A | 0 | 23 | 460 | 1 | 439 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 23 | 460 | 1 | 439 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 23 | 460 | 1 | 439 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |