Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.013G114800.8 |
Family | GH3 |
Protein Properties | Length: 434 Molecular Weight: 47402.1 Isoelectric Point: 6.6752 |
Chromosome | Chromosome/Scaffold: 13 Start: 28433119 End: 28436604 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 3 | 145 | 7e-37 |
EIVPGLQGDMPAKSSKGVPFVAGNKNVAACAKHYVGDGGTTKGINENNTVINWHDLLSIHMPGYYTSIIKGVSTVMVSYSSWNGVKMHANRDLVTGFLKN KLRFRGFVISDWEGIDRITYPPHANYTYSIQAAIGSGIDMVMV |
Full Sequence |
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Protein Sequence Length: 434 Download |
MTEIVPGLQG DMPAKSSKGV PFVAGNKNVA ACAKHYVGDG GTTKGINENN TVINWHDLLS 60 IHMPGYYTSI IKGVSTVMVS YSSWNGVKMH ANRDLVTGFL KNKLRFRGFV ISDWEGIDRI 120 TYPPHANYTY SIQAAIGSGI DMVMVPYDYS SFIDGLTFLV KNNFIPMSRI DDAVKRILRV 180 KFAVGLFENP LADNSLVDQL GRQEHRELAR EAVRRSLVLL KNGHYADQPL LPLPKKTSKI 240 LVAGSHADNL GYQCGGWTIE WQGFSGNDLT NGTTVLTAIK NTVDSSTNVV YEENPDPKFV 300 KSNNFSCAIV VVGEHPYVET KGDSMNLTIP EPGPTTIRNV CGALKCVVIL MSGRPVVIEP 360 DIDSMDALVA AWLPGSEGQG VADVLFGDYG FSGKLPRTWF KTVDQLPMNV GDPHYDPLFP 420 FGFGLTTEPT KAY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 8.0e-27 | 3 | 409 | 451 | + Probable beta-xylosidase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 5.0e-42 | 3 | 180 | 179 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 6.0e-48 | 10 | 259 | 256 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 1.0e-52 | 4 | 426 | 489 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 9.0e-54 | 217 | 426 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ17461.1 | 0 | 1 | 430 | 196 | 625 | beta-D-glucosidase [Gossypium hirsutum] |
GenBank | AAZ15705.1 | 0 | 1 | 433 | 195 | 627 | endo-alpha-1,4-glucanase [Gossypium hirsutum] |
GenBank | ABK95015.1 | 0 | 1 | 431 | 194 | 624 | unknown [Populus trichocarpa] |
RefSeq | XP_002319151.1 | 0 | 1 | 431 | 171 | 601 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325849.1 | 0 | 1 | 431 | 181 | 611 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 1 | 433 | 173 | 605 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 1 | 433 | 173 | 605 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iew_A | 0 | 1 | 433 | 173 | 605 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iev_A | 0 | 1 | 433 | 173 | 605 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1ieq_A | 0 | 1 | 433 | 173 | 605 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DW500162 | 318 | 102 | 419 | 0 |
DT552183 | 299 | 13 | 311 | 0 |
DT569328 | 316 | 86 | 401 | 0 |
GR716701 | 285 | 69 | 353 | 0 |
JK801647 | 260 | 174 | 433 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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