Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.013G114800.9 |
Family | GH3 |
Protein Properties | Length: 411 Molecular Weight: 45094.4 Isoelectric Point: 6.6745 |
Chromosome | Chromosome/Scaffold: 13 Start: 28433119 End: 28436604 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 3 | 122 | 8.5e-36 |
SKNVAACAKHYVGDGGTTKGINENNTVINWHDLLSIHMPGYYTSIIKGVSTVMVSYSSWNGVKMHANRDLVTGFLKNKLRFRGFVISDWEGIDRITYPPH ANYTYSIQAAIGSGIDMVMV |
Full Sequence |
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Protein Sequence Length: 411 Download |
MSSKNVAACA KHYVGDGGTT KGINENNTVI NWHDLLSIHM PGYYTSIIKG VSTVMVSYSS 60 WNGVKMHANR DLVTGFLKNK LRFRGFVISD WEGIDRITYP PHANYTYSIQ AAIGSGIDMV 120 MVPYDYSSFI DGLTFLVKNN FIPMSRIDDA VKRILRVKFA VGLFENPLAD NSLVDQLGRQ 180 EHRELAREAV RRSLVLLKNG HYADQPLLPL PKKTSKILVA GSHADNLGYQ CGGWTIEWQG 240 FSGNDLTNGT TVLTAIKNTV DSSTNVVYEE NPDPKFVKSN NFSCAIVVVG EHPYVETKGD 300 SMNLTIPEPG PTTIRNVCGA LKCVVILMSG RPVVIEPDID SMDALVAAWL PGSEGQGVAD 360 VLFGDYGFSG KLPRTWFKTV DQLPMNVGDP HYDPLFPFGF GLTTEPTKAY * 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 8.0e-27 | 6 | 386 | 424 | + Probable beta-xylosidase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 4.0e-43 | 1 | 157 | 158 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 2.0e-48 | 1 | 236 | 239 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 1.0e-51 | 5 | 403 | 465 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-54 | 194 | 403 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ17461.1 | 0 | 1 | 407 | 218 | 625 | beta-D-glucosidase [Gossypium hirsutum] |
GenBank | AAZ15705.1 | 0 | 3 | 410 | 220 | 627 | endo-alpha-1,4-glucanase [Gossypium hirsutum] |
GenBank | ABK95015.1 | 0 | 6 | 408 | 222 | 624 | unknown [Populus trichocarpa] |
RefSeq | XP_002319151.1 | 0 | 6 | 408 | 199 | 601 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325849.1 | 0 | 6 | 408 | 209 | 611 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 1 | 410 | 195 | 605 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 1 | 410 | 195 | 605 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iew_A | 0 | 1 | 410 | 195 | 605 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iev_A | 0 | 1 | 410 | 195 | 605 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1ieq_A | 0 | 1 | 410 | 195 | 605 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DW500162 | 318 | 79 | 396 | 0 |
DT569328 | 316 | 63 | 378 | 0 |
DT552183 | 286 | 3 | 288 | 0 |
GR716701 | 285 | 46 | 330 | 0 |
JK801647 | 260 | 151 | 410 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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