Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.013G168800.1 |
Family | GT14 |
Protein Properties | Length: 424 Molecular Weight: 47777.4 Isoelectric Point: 9.5095 |
Chromosome | Chromosome/Scaffold: 13 Start: 45450896 End: 45454314 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 82 | 338 | 0 |
FAYLVSGSKGDLEKLWRTLHALYHPRNQYVVHLDLEAPAVERVTLASRIANHTVFSKVGNVYMITKANMVTYRGPTMVANTLHACAIHLNRSKNWDWFIN LSASDYPLVTQDDLIDAFSDLNRNLNFIEHTSQLGWKADKRAMPLIIDPGLYMSTKSDIFWTSQRRALPTAFKLFTGSAWTVLSHSFVEFCVWGWDNLPR TLLMYYTNFLSSPEGYFQTVVCNVPEFAKTVVNHDLHYISWDTPPKQHPHILTLNDM |
Full Sequence |
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Protein Sequence Length: 424 Download |
MVSMLNMEKK WVFPLVITSL ICTILVVTCF NMGLVSSVHK INSIFSIFPA HISMNQRKPG 60 YAESKIDTGP LPPPSGPALP RFAYLVSGSK GDLEKLWRTL HALYHPRNQY VVHLDLEAPA 120 VERVTLASRI ANHTVFSKVG NVYMITKANM VTYRGPTMVA NTLHACAIHL NRSKNWDWFI 180 NLSASDYPLV TQDDLIDAFS DLNRNLNFIE HTSQLGWKAD KRAMPLIIDP GLYMSTKSDI 240 FWTSQRRALP TAFKLFTGSA WTVLSHSFVE FCVWGWDNLP RTLLMYYTNF LSSPEGYFQT 300 VVCNVPEFAK TVVNHDLHYI SWDTPPKQHP HILTLNDMDK MIRSNAAFAR KFSQDDPVLD 360 KIDKDLLGRE KGSFTPGAWC SGEPKCLKVG DMNKIKPGPG AQRVRQLIAK LSTKAILGRD 420 QCK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-83 | 82 | 342 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 5 | 423 | 419 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI20295.1 | 0 | 7 | 423 | 1 | 416 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002285024.1 | 0 | 5 | 423 | 4 | 421 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002317501.1 | 0 | 5 | 423 | 4 | 419 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329084.1 | 0 | 5 | 423 | 4 | 419 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002533550.1 | 0 | 5 | 423 | 4 | 417 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.000000004 | 93 | 357 | 96 | 371 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.000000004 | 93 | 357 | 96 | 371 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.000000004 | 93 | 357 | 96 | 371 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.000000004 | 93 | 357 | 96 | 371 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00000001 | 93 | 357 | 96 | 371 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |