| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.013G189100.1 |
| Family | GT41 |
| Protein Properties | Length: 991 Molecular Weight: 111271 Isoelectric Point: 6.5315 |
| Chromosome | Chromosome/Scaffold: 13 Start: 49034857 End: 49044648 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT41 | 571 | 758 | 0 |
| KYAAHCSMVASRFALPPFNHPAPNRIKGNGGNERLKVGYVSSDFGNHPLSHLMGSVFGMHNRENVEVFCYALSQNDGTEWRQRIQSEAEHFIDVSAMSSD VIAKMINEDGIQILINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGADYIDYLVTDEFVSPLCYSHIYSEKLVHLPHCYFVNDYKQ | |||
| GT41 | 770 | 972 | 0 |
| HKRSDYGLPEDKFIFACFNQLYKMDPEIFNTWCNILKRVPNSALWLLKFPAAGEMRLRAYAAAQGVQPEQIIFTDVAMKHEHIRRSALADLCLDTPLCNA HTTGTDVLWAGLPMVTLPLEKMATRVAGSLCLATGLGEDMIVNSMKEYEEQAVTLALNRPKLQALTKKLKEARLTCPLFDTARWVRNLERAYLKMWNLYC SGQ | |||
| Full Sequence |
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| Protein Sequence Length: 991 Download |
| MLSLQNGVGI SRAAPYGVGV FDRADETSDA EAVAAGKSAV YALKQEPASS FSIVPHNGHD 60 SHEVDEDMHL ALAHQMYKSG NYKQALDHSS AVYNQNPLRT DNLLLLGAIY YQLHNYDMCI 120 AKNEEALRIE PRFAECYGNM ANAWKEKGDI DVAIRYYMIA IELRPNFADA WSNLASAYMR 180 KGRFNEAAQC CRQALQLNPL LVDAHSNLGN LMKAQGLVQE AYSCYLEALR IQPTFAIAWS 240 NLAGLFMDSG DLNRALQYYK EAVKLKPTFP DAYLNLGNIY KALGMPQEAI VCYQRAVQTR 300 PNNAIALGNL ASTYYERGQL DLAILHYKQA IACDQRFLEA YNNLGNALKD VGRVDEAIQC 360 YNQCLTLQPN HPQALTNLGN IYMEWNMVAA AASYYKATLS VTTGLSAPFN NLAVIYKQQG 420 NYVEAISCYN EVLRIDPLAA DGLVNRGNTY KEIGRVTEAI QDYIRAINIR PNMAEAHANL 480 ASAYKDSGHV EAAIKSYKQA LHLRPDFPEA TCNLLHTLQC VCSWEDRDQM FTEVEGIIRR 540 QINMSVLPSV QPFHAIAYPI DPMLALDISR KYAAHCSMVA SRFALPPFNH PAPNRIKGNG 600 GNERLKVGYV SSDFGNHPLS HLMGSVFGMH NRENVEVFCY ALSQNDGTEW RQRIQSEAEH 660 FIDVSAMSSD VIAKMINEDG IQILINLNGY TKGARNEIFA MQPAPIQVSY MGFPGTTGAD 720 YIDYLVTDEF VSPLCYSHIY SEKLVHLPHC YFVNDYKQKN RDVLDPTCQH KRSDYGLPED 780 KFIFACFNQL YKMDPEIFNT WCNILKRVPN SALWLLKFPA AGEMRLRAYA AAQGVQPEQI 840 IFTDVAMKHE HIRRSALADL CLDTPLCNAH TTGTDVLWAG LPMVTLPLEK MATRVAGSLC 900 LATGLGEDMI VNSMKEYEEQ AVTLALNRPK LQALTKKLKE ARLTCPLFDT ARWVRNLERA 960 YLKMWNLYCS GQQPQHFKVT ENDFDFPYDR * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3914 | Spy | 1.0e-103 | 410 | 968 | 570 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_187074.1 | 0 | 61 | 990 | 48 | 977 | SEC (secret agent); transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002270163.1 | 0 | 1 | 990 | 2 | 986 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319130.1 | 0 | 65 | 987 | 1 | 923 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002325368.1 | 0 | 118 | 990 | 1 | 873 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002522031.1 | 0 | 1 | 990 | 1 | 979 | o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4gz6_D | 0 | 369 | 756 | 6 | 390 | A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana |
| PDB | 4gz6_D | 0 | 772 | 977 | 514 | 718 | A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana |
| PDB | 4gz6_D | 6e-31 | 131 | 278 | 6 | 153 | A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana |
| PDB | 4gz6_D | 2e-26 | 199 | 351 | 6 | 158 | A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana |
| PDB | 4gz6_D | 4e-24 | 165 | 311 | 6 | 152 | A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO795247 | 461 | 531 | 991 | 0 |
| HO778725 | 450 | 542 | 991 | 0 |
| HO798232 | 433 | 41 | 473 | 0 |
| HO798232 | 367 | 139 | 505 | 0 |
| HO795247 | 52 | 479 | 530 | 2e-19 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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