Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.013G193500.2 |
Family | GT47 |
Protein Properties | Length: 477 Molecular Weight: 53802.5 Isoelectric Point: 9.1371 |
Chromosome | Chromosome/Scaffold: 13 Start: 49483354 End: 49486028 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 186 | 461 | 0 |
RSFKIYVYPHRRDDPFAHVFLPVDFEPGGNYASESYFKKALMNSHFITEDPRKADLFFLPFSIARLRHDRRVGGGGIQSFIRDYISNISTKYPYWNRTGG ADHFYVACHSIGRSAMAKAEDVKLNAIQIVCSSSYFLPGYVAHKDASLPQVWPRTDDPPTTTSERKKLAFFAGAINSPVREKLVKFWRNDSEIYAHFGRL KTPYADELLGSKFCLHVKGFEVNTARIADSLYYGCVPIILANYYDLPFADILNWKSFSIAVVTVDIPLLKKILRGI |
Full Sequence |
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Protein Sequence Length: 477 Download |
NNNHYYLLIL VYLHFLPKEA TETSSSVYVA SVLVALFSNF EKGQYLPLNH PKQMAHPSML 60 LHRPLASLPS SAFFFLPATL ALFTTLFILF YIFTTPSLFI SHQHKHNLKY PLGPSQSSPL 120 TPILPSNGSF HLSAKFPFND VFGGEDGTVS PVSSRSHFGS KGNSMNDIDV FRDGDIFLED 180 YQQMNRSFKI YVYPHRRDDP FAHVFLPVDF EPGGNYASES YFKKALMNSH FITEDPRKAD 240 LFFLPFSIAR LRHDRRVGGG GIQSFIRDYI SNISTKYPYW NRTGGADHFY VACHSIGRSA 300 MAKAEDVKLN AIQIVCSSSY FLPGYVAHKD ASLPQVWPRT DDPPTTTSER KKLAFFAGAI 360 NSPVREKLVK FWRNDSEIYA HFGRLKTPYA DELLGSKFCL HVKGFEVNTA RIADSLYYGC 420 VPIILANYYD LPFADILNWK SFSIAVVTVD IPLLKKILRG ITSDEYSSLR GNVLKG* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 5.0e-67 | 184 | 461 | 296 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD28410.1 | 0 | 54 | 475 | 1 | 448 | Exostosin-like [Medicago truncatula] |
EMBL | CBI39073.1 | 0 | 173 | 475 | 109 | 412 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265438.1 | 0 | 95 | 475 | 45 | 410 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002325425.1 | 0 | 184 | 475 | 1 | 289 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525728.1 | 0 | 184 | 475 | 1 | 293 | catalytic, putative [Ricinus communis] |