Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.013G216400.1 |
Family | GH35 |
Protein Properties | Length: 830 Molecular Weight: 93610.3 Isoelectric Point: 7.0613 |
Chromosome | Chromosome/Scaffold: 13 Start: 53634828 End: 53638787 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 33 | 334 | 0 |
IIDGNHRIILSGSIHYPRSTAQMWPDLIRKAKEGGLDAVETYVFWNAHEPARRQYDFNGNHDIIRFLKTIQDQGLYAILRIGPYTCAEWNYGGFPVWLHN MPGVSLRTKNDVFMNEMKNFTTLIVDMVKKEKLFASQGGNIILAQVENEYGNVMDPYGDDGKSYINWCAQMADSLDIGVPWIMCQQVAAPKPMLETCNGW YCDEYKPKDPNTPKMWTENWTGWFKSWGGADPLRTPEDLAYSVARFFQKGGTLQNYYMYHGGTNFGRTSGGPYITTTYDYNAPLDEYGNLNQPKWGHLKQ LH |
Full Sequence |
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Protein Sequence Length: 830 Download |
MNIFNILFSV LIFSFILFHS NALNVTHDSR SIIIDGNHRI ILSGSIHYPR STAQMWPDLI 60 RKAKEGGLDA VETYVFWNAH EPARRQYDFN GNHDIIRFLK TIQDQGLYAI LRIGPYTCAE 120 WNYGGFPVWL HNMPGVSLRT KNDVFMNEMK NFTTLIVDMV KKEKLFASQG GNIILAQVEN 180 EYGNVMDPYG DDGKSYINWC AQMADSLDIG VPWIMCQQVA APKPMLETCN GWYCDEYKPK 240 DPNTPKMWTE NWTGWFKSWG GADPLRTPED LAYSVARFFQ KGGTLQNYYM YHGGTNFGRT 300 SGGPYITTTY DYNAPLDEYG NLNQPKWGHL KQLHDVLHSI EHTLTNGDII NEKLSNLVMA 360 TIYQTKEKSS CFLSNTNTKI DANVNFGGIK FFVPAWSISI LPDCREEAYN TAKVSTQTSL 420 MVKKLNKAED EPSSLKWTWR PELIESASVQ GRGDVSLNKI VDQKDMANDA SDYLWYMTSI 480 DVAKNDPMLN GTVTLRVNDT GHVLHAFFNG EYIGSQWSKY GNNNVTYVFE RNINLSLGKN 540 LISLLSVTVG FKNYGPMFDL VGAGITSPIE LVLNKNVVKD LSSNKWTYKV GLNGISNKFF 600 DIDCASKSSS KWVSDPIPIY RNFTWYKTTF KAPLENKPVV VDLLGLGKGM AWVNGHNLGR 660 YWPSYIADKQ LCKTKTCDYR GRYSNSKCVS KCGEPTQRWY HVPRSFLKDG ENTLVLFEEF 720 GGNPSGVQFQ TVEIGSICIN THEGKEVKLS CQDRPISKIK FASFGSPQGV CGSFDKSEYD 780 SKVDALSILE KECVGKESCS FKITEDKFGT PSCEVKKLAV EAVCEDFTF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 5.0e-5 | 47 | 192 | 159 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 8.0e-15 | 749 | 824 | 80 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 2.0e-22 | 25 | 327 | 360 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 2.0e-150 | 31 | 334 | 323 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 24 | 824 | 827 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ09953.1 | 0 | 7 | 824 | 7 | 827 | beta-galactosidase [Mangifera indica] |
EMBL | CBI27773.1 | 0 | 6 | 824 | 22 | 835 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002297749.1 | 0 | 1 | 824 | 1 | 823 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516237.1 | 0 | 10 | 824 | 9 | 825 | beta-galactosidase, putative [Ricinus communis] |
RefSeq | XP_002516256.1 | 0 | 9 | 824 | 30 | 848 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 31 | 333 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 2e-40 | 34 | 321 | 12 | 314 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 0.006 | 495 | 721 | 401 | 573 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 2e-40 | 34 | 321 | 12 | 314 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |