y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.013G218500.1 |
Family | CE8 |
Protein Properties | Length: 559 Molecular Weight: 63190.9 Isoelectric Point: 9.1796 |
Chromosome | Chromosome/Scaffold: 13 Start: 53834240 End: 53836133 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 243 | 541 | 0 |
AIVAKDGNGQFNTISAALVAAPKKSNVRHVIYIKAGIYNEYITVDKQYTNILMYGDGPRKTIVTGRKGVKDGGGITTWQTATFSAIGNGFIAKSMGFQNT AGPEKHQAVALRIQSDKSAFFNCRIDAYQDTLYNQVNRQFFRNCVISGTIDFIFGDSSTVIQNSLIIVRRPMDHQFNTVTAQGKDYIDENTGIVIQNCKI VPENKLFNDRFKFATYLGRPWKKFSTTVIMESKLGDFIRPEGWISFEGPDKNNYEETLYYAEYNNRGPGSNLNERVNWKGYHKINRTTAMKFTIQSFLS |
Full Sequence |
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Protein Sequence Length: 559 Download |
MSKKVIIAVV SIILVVGVIA TAIATVYHKR GDNTDLHKKI NIMSNFCLYT LYQESCWQTL 60 NSVNSTDPKE FIAKAILAAE EATNKFFNYS DSLSIQVENN SLTKMALEDC KDMMNYAIDS 120 FKASYSNVYD SELHNINVSI NDLRTWLSAG ISYQQSCLDG FEHNNNMKEI MQKGIIVASE 180 LTRNALTIVT NLQNILSKFD FQLNITNARK LLPIEKNNYP SWFTAKDRQL LTRIDNSNLK 240 PNAIVAKDGN GQFNTISAAL VAAPKKSNVR HVIYIKAGIY NEYITVDKQY TNILMYGDGP 300 RKTIVTGRKG VKDGGGITTW QTATFSAIGN GFIAKSMGFQ NTAGPEKHQA VALRIQSDKS 360 AFFNCRIDAY QDTLYNQVNR QFFRNCVISG TIDFIFGDSS TVIQNSLIIV RRPMDHQFNT 420 VTAQGKDYID ENTGIVIQNC KIVPENKLFN DRFKFATYLG RPWKKFSTTV IMESKLGDFI 480 RPEGWISFEG PDKNNYEETL YYAEYNNRGP GSNLNERVNW KGYHKINRTT AMKFTIQSFL 540 SSKENWLPFA DIPFNAML* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02217 | PLN02217 | 2.0e-145 | 40 | 554 | 518 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 7.0e-152 | 47 | 558 | 516 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 1.0e-154 | 47 | 558 | 533 | + pectinesterase | ||
pfam01095 | Pectinesterase | 2.0e-163 | 242 | 540 | 300 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 42 | 553 | 524 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI26012.1 | 0 | 28 | 554 | 33 | 563 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274176.1 | 0 | 33 | 554 | 37 | 559 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002275000.1 | 0 | 28 | 554 | 33 | 563 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298186.1 | 0 | 35 | 553 | 40 | 552 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002303172.1 | 0 | 28 | 553 | 29 | 553 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 235 | 558 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 242 | 547 | 4 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 7e-22 | 242 | 548 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 7e-22 | 242 | 548 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 7e-22 | 242 | 548 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |