Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.013G221800.1 |
Family | CE8 |
Protein Properties | Length: 498 Molecular Weight: 55229.5 Isoelectric Point: 7.3497 |
Chromosome | Chromosome/Scaffold: 13 Start: 54174451 End: 54176200 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 215 | 466 | 0 |
VTVAVDGTGNFSTIGDAIRFAPNKSKERVMIYVREGVYEENVVIPSCKTNIVLIGDGSEVTFITGNRSVVDGWTTFRSATLAVSGEGFLARDITIQNRAG PEKHQAVALRVSADLAAFYRCTFNGYQDTLYVHSFRQFYRECNISGTIDYIFGNAAAVFQACNIISRMPMPGQFTYTGISIQNCSILATNELYRNSNNVK SYLGRPWRLYSTAVFLKSYIDDFIDPNGWRKWSSDEGLDTLYYGEYNNYGQS |
Full Sequence |
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Protein Sequence Length: 498 Download |
MASSSKAISI LFITIFFSST LGLNISSTNS LSPNLTSIQS ICQSTPYPDS CFDSLKLSIS 60 INISPDILTY LLQTLHTALS EATKLTNLFS NGGNSNDIVE KQRGTLQDCK ELHETTLSIL 120 EKTVSSIKDG DSKKLADARV YLSAALTNKN TCLEGLDSAL GPLKPVMVKS LIGTYKHVSN 180 SLSMLPKLGK RHRNRRLSCR VLRGVDDEYN PREVVTVAVD GTGNFSTIGD AIRFAPNKSK 240 ERVMIYVREG VYEENVVIPS CKTNIVLIGD GSEVTFITGN RSVVDGWTTF RSATLAVSGE 300 GFLARDITIQ NRAGPEKHQA VALRVSADLA AFYRCTFNGY QDTLYVHSFR QFYRECNISG 360 TIDYIFGNAA AVFQACNIIS RMPMPGQFTY TGISIQNCSI LATNELYRNS NNVKSYLGRP 420 WRLYSTAVFL KSYIDDFIDP NGWRKWSSDE GLDTLYYGEY NNYGQSRMIG AYDFAVSEFI 480 ISEAWLDSTW FPYDYGI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 5.0e-128 | 40 | 497 | 513 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 8.0e-130 | 42 | 497 | 536 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
PLN02713 | PLN02713 | 6.0e-143 | 40 | 497 | 536 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 5.0e-156 | 215 | 464 | 262 | + Pectinesterase. | ||
PLN02416 | PLN02416 | 0 | 40 | 497 | 499 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08348.1 | 0 | 1 | 497 | 1 | 534 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
DDBJ | BAH56489.1 | 0 | 1 | 497 | 1 | 543 | pectin methylesterase 1 [Prunus persica] |
RefSeq | XP_002273535.1 | 0 | 2 | 497 | 3 | 529 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326320.1 | 0 | 15 | 497 | 16 | 539 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516192.1 | 0 | 31 | 497 | 37 | 543 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 215 | 497 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 217 | 497 | 7 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-24 | 225 | 469 | 18 | 313 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-24 | 225 | 469 | 18 | 313 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-24 | 225 | 469 | 18 | 313 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |