| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.013G260700.4 |
| Family | GH3 |
| Protein Properties | Length: 435 Molecular Weight: 47864.5 Isoelectric Point: 4.6661 |
| Chromosome | Chromosome/Scaffold: 13 Start: 57530489 End: 57533470 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH3 | 2 | 145 | 8.4e-40 |
| TSIITGLQGKPPADYPKGYPFVAGRNNVIACAKHFVGDGGTEKGINEGNTILSYDDLESIHMAPYLDCISQGVSTIMASYSSWNGRQLHADHFLLTEILK DKLGFKGFVISDWEALDRLTEPRGSNYCYCISTAVNAGVDMVMV | |||
| Full Sequence |
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| Protein Sequence Length: 435 Download |
| MTSIITGLQG KPPADYPKGY PFVAGRNNVI ACAKHFVGDG GTEKGINEGN TILSYDDLES 60 IHMAPYLDCI SQGVSTIMAS YSSWNGRQLH ADHFLLTEIL KDKLGFKGFV ISDWEALDRL 120 TEPRGSNYCY CISTAVNAGV DMVMVPLRYK QFMDDLTFLV ESGEVLMSRI DDAVERILRV 180 KFVAGLFEYP FSDRSLLDIV GCKLHRELAR EAVRKSLVLL KNGKNPENPF LPLDRTAKRI 240 LVAGSHADNL GYQCGGWTST WFGGSGRITI GTTILDAIRE SAGDETEVIY DEYPSTNTLA 300 GQYSFAIVVV GEPPYAETLG DNKELVIPFN GSDIISSVAD KIPTLAILIS GRPLVLEPQV 360 LEKVDAFIAA WLPGTEGRGV TDVVFGDFEF EGRLPMTWFR SNDQLPMNPG QNSYDPLFPL 420 GFGLTYNKEK KPQE* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 6.0e-26 | 25 | 428 | 456 | + Probable beta-xylosidase; Provisional | ||
| pfam00933 | Glyco_hydro_3 | 1.0e-40 | 3 | 180 | 179 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| pfam01915 | Glyco_hydro_3_C | 4.0e-45 | 217 | 426 | 229 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| COG1472 | BglX | 9.0e-46 | 21 | 249 | 234 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| PRK15098 | PRK15098 | 6.0e-51 | 7 | 426 | 487 | + beta-D-glucoside glucohydrolase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN81230.1 | 0 | 1 | 429 | 204 | 635 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI16000.1 | 0 | 1 | 429 | 151 | 582 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002279757.1 | 0 | 1 | 429 | 285 | 716 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313393.1 | 0 | 1 | 425 | 170 | 595 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525596.1 | 0 | 1 | 429 | 174 | 603 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1j8v_A | 0 | 1 | 431 | 173 | 604 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1iex_A | 0 | 1 | 431 | 173 | 604 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1iew_A | 0 | 1 | 431 | 173 | 604 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1iev_A | 0 | 1 | 431 | 173 | 604 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1ieq_A | 0 | 1 | 431 | 173 | 604 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| DY265467 | 306 | 1 | 303 | 0 |
| FC882555 | 248 | 1 | 248 | 0 |
| GO800387 | 333 | 1 | 331 | 0 |
| JK802926 | 245 | 148 | 392 | 0 |
| GO876678 | 321 | 58 | 377 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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