y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.013G261500.1 |
Family | GH35 |
Protein Properties | Length: 812 Molecular Weight: 91588.5 Isoelectric Point: 5.7973 |
Chromosome | Chromosome/Scaffold: 13 Start: 57569318 End: 57573209 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 33 | 316 | 0 |
IIDGNHRIILSGSIHYPRSTAQMWPDLIRKAKEGGLDAVETYVFWNAHEPARRQYDFSGNLDLIRFLKTIQDQGLYAILRIGPYTCAEWNYGGFPVWLHN MPGVSLRTKNDVFMNEMKNFTTLIVDMVENEYGNVMEPYGDEGKSYINWCAQMADSLDIGVPWIMCQQAAPPKPMLETCNGWYCDEYKPKDPNTPKLWTE NWTGWFKSWGGADPFRTAEDLAYSVARFFQKGGTLQNYYMYHGGTNFGRTSGGPYITTTYDYNAPLDEYGNLNQPKWGHLKQLH |
Full Sequence |
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Protein Sequence Length: 812 Download |
MNIFNLLFTA FIFSFILFHS NALNVTHDSR SIIIDGNHRI ILSGSIHYPR STAQMWPDLI 60 RKAKEGGLDA VETYVFWNAH EPARRQYDFS GNLDLIRFLK TIQDQGLYAI LRIGPYTCAE 120 WNYGGFPVWL HNMPGVSLRT KNDVFMNEMK NFTTLIVDMV ENEYGNVMEP YGDEGKSYIN 180 WCAQMADSLD IGVPWIMCQQ AAPPKPMLET CNGWYCDEYK PKDPNTPKLW TENWTGWFKS 240 WGGADPFRTA EDLAYSVARF FQKGGTLQNY YMYHGGTNFG RTSGGPYITT TYDYNAPLDE 300 YGNLNQPKWG HLKQLHDVLH SIEYILTNGE VKNEKLSNLV MATIYQTKEK SSCFLSNTNT 360 KIDANVNFGG INYFVPAWSI SILPDCREEA YNTAKVSSQT SLMVKKLNKA EDEPNSLKWM 420 WRPELIESTS VQGRGDVSVN KIVDQKDMAN DASDYLWYMT SIDVAKDDPM LNGTVTLRVN 480 DTGHVLHAFF NGEYIGSQWS KYGNNNVTYV FERNIEPSPG KNLISLLSVT VGLKNYGPMF 540 DLVGAGITSP IELVLNKNDV KDLSSNKWIY KVGLNGISNK FFDTDCASKS SSKWVSDPIS 600 IDRNFTWYKT TFKAPLGNKP VVVDLLGLGK GMAWVNGHSL GRYWPSYIAD KQLCKTETCD 660 YRGRYSDSKC VSKCGEPTQR WYHVPRSFLK DGENTLVLFE EFGGNPSGIQ FQTVEIGSVC 720 INTHEGKEVE LSCQDRPISK IKFASFGSPQ GVCGSFDKSE SDSEVDALSI LEKECLGKES 780 CSFKITEDKF GRPSCEVKKL AVEAVCEDFT F* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 3.0e-6 | 47 | 130 | 85 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 3.0e-14 | 731 | 806 | 80 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 3.0e-21 | 25 | 309 | 356 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 3.0e-138 | 31 | 316 | 317 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 3 | 806 | 848 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ09953.1 | 0 | 2 | 806 | 6 | 827 | beta-galactosidase [Mangifera indica] |
EMBL | CBI27773.1 | 0 | 10 | 806 | 23 | 835 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002297749.1 | 0 | 6 | 806 | 7 | 823 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516237.1 | 0 | 7 | 806 | 6 | 825 | beta-galactosidase, putative [Ricinus communis] |
RefSeq | XP_002516256.1 | 0 | 10 | 806 | 33 | 848 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 3.00004e-41 | 31 | 315 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.007 | 476 | 703 | 399 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 2e-35 | 34 | 303 | 12 | 314 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 2e-35 | 34 | 303 | 12 | 314 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |