| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.013G269400.2 |
| Family | GT47 |
| Protein Properties | Length: 434 Molecular Weight: 49948.3 Isoelectric Point: 9.8022 |
| Chromosome | Chromosome/Scaffold: 13 Start: 58103266 End: 58105615 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 78 | 377 | 0 |
| DLKIFIYELPSEYNEDWLSNKRCSNHLFASEVAIHRALMNTYDLRTFDPYEADFFFVPVYVSCNFSTVNGFPAIGHARSLISSAIQLISSNYPFWNRTQG SDHIFVASHDYGACFHAMEDRAIDDGIPDFMKNSIILQTFGVNFKHPCQDVEHVVIPPYIPPESVRNTLEKSPLTGNRDIMVFFRGKMEVHPKNVSGKFY GKKVRTEIWRRYNGDQRFYLQRQRFAGYQSEIVRSVFCLCPLGWAPWSPRLVESVALGCVPVIIADGIQLPFPSAVKWSEISLTVAERDVGKLGRILEHV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 434 Download |
| MRTLHKGRQS EKSLFFKYYK WVLWFSFTLY FLTSFFITNK PLPLSKTRVS GSKSSLASRV 60 LFESVNKTRH KSKPKNPDLK IFIYELPSEY NEDWLSNKRC SNHLFASEVA IHRALMNTYD 120 LRTFDPYEAD FFFVPVYVSC NFSTVNGFPA IGHARSLISS AIQLISSNYP FWNRTQGSDH 180 IFVASHDYGA CFHAMEDRAI DDGIPDFMKN SIILQTFGVN FKHPCQDVEH VVIPPYIPPE 240 SVRNTLEKSP LTGNRDIMVF FRGKMEVHPK NVSGKFYGKK VRTEIWRRYN GDQRFYLQRQ 300 RFAGYQSEIV RSVFCLCPLG WAPWSPRLVE SVALGCVPVI IADGIQLPFP SAVKWSEISL 360 TVAERDVGKL GRILEHVAKT NLSTIQKNLW DPAVSKALLF NDHMQEGDAT WQVLESLYKK 420 LDRSYKRSRV SSQ* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam03016 | Exostosin | 4.0e-72 | 75 | 374 | 308 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX33322.1 | 0 | 1 | 433 | 1 | 442 | secondary cell wall-related glycosyltransferase family 47 [Populus tremula x Populus tremuloides] |
| GenBank | ABI64067.1 | 0 | 1 | 433 | 1 | 442 | glycosyltransferase GT47C [Populus tremula x Populus alba] |
| RefSeq | XP_002275679.1 | 0 | 1 | 422 | 17 | 441 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002314302.1 | 0 | 1 | 433 | 21 | 462 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523710.1 | 0 | 1 | 433 | 18 | 461 | transferase, putative [Ricinus communis] |
