| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os01g14140.1 |
| Family | CBM43 |
| Protein Properties | Length: 122 Molecular Weight: 12996.7 Isoelectric Point: 8.1042 |
| Chromosome | Chromosome/Scaffold: 1 Start: 7928083 End: 7929764 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 38 | 118 | 3.4e-31 |
| WCVAKPSADDKVLTANLNYACSQVNCGVIQQGGPCFNPNNLVSHAAVAMNLYYAAHGRNAWNCYFQNSALVVQSDPSYGSC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 122 Download |
| MARGAQPSAS LLLFSLGLVL LYFSSGSTIR LAEGQKTWCV AKPSADDKVL TANLNYACSQ 60 VNCGVIQQGG PCFNPNNLVS HAAVAMNLYY AAHGRNAWNC YFQNSALVVQ SDPSYGSCTY 120 Y* 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 9.0e-17 | 37 | 106 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-34 | 37 | 120 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003674 | molecular_function |
| GO:0005623 | cell |
| GO:0008150 | biological_process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG36169.1 | 0 | 16 | 121 | 5 | 109 | glucan endo-1,3-beta-glucosidase 4 precursor [Zea mays] |
| GenBank | ACG39487.1 | 0 | 22 | 121 | 23 | 122 | glucan endo-1,3-beta-glucosidase 4 precursor [Zea mays] |
| RefSeq | NP_001042566.1 | 0 | 1 | 121 | 1 | 121 | Os01g0243700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002446660.1 | 0 | 1 | 121 | 1 | 122 | hypothetical protein SORBIDRAFT_06g020000 [Sorghum bicolor] |
| RefSeq | XP_002454863.1 | 0 | 1 | 121 | 2 | 123 | hypothetical protein SORBIDRAFT_03g000270 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 2e-28 | 37 | 120 | 12 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
