| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os01g15780.1 |
| Family | GT4 |
| Protein Properties | Length: 483 Molecular Weight: 52729.1 Isoelectric Point: 9.4491 |
| Chromosome | Chromosome/Scaffold: 1 Start: 8885505 End: 8892462 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 279 | 445 | 3.3e-24 |
| SEDLVFAIINSVSRGKGQDLFLQAFYQGVQLIEQKKLKVPTMHAVVVGSDINAQTKFETQLRDFAVKNGIQDRVHFVNKTLAVAPYLAATDVLVQNSQAR GECFGRITIEAMAFKLPVLGTAAGGTTEIVVDGSTGLLHPAGKEGVAPLAKNMVRLASHEEDRVSMG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 483 Download |
| MAKPSSAAAA SGGGRGPAHH HRTRLLLLLL LAVAACASTA GFLLCGAMLD PCDVDARRGS 60 GSSAAAVATT RTGAVAGNPL EFMRSKLMLL VSHELSLSGG PLLLMELAFL LRQVGSQVVW 120 ITNQRSEETN DVTYSLEHKM LSHGVQVLPA RGHEAIDTAL KADLVILNTA VAGKWLDAVL 180 NDHVPQVLPK ILWWIHEMRG HYFKLEYVKH LPLVAGAMID SHTTAEYWKT RTHDRLKIQM 240 PQTYVVHLGN SKELMEVAED NVARRVLREH IREFLGVRSE DLVFAIINSV SRGKGQDLFL 300 QAFYQGVQLI EQKKLKVPTM HAVVVGSDIN AQTKFETQLR DFAVKNGIQD RVHFVNKTLA 360 VAPYLAATDV LVQNSQARGE CFGRITIEAM AFKLPVLGTA AGGTTEIVVD GSTGLLHPAG 420 KEGVAPLAKN MVRLASHEED RVSMGRKGYG RVKEMFMEHH MAGRIAAVLQ EVLKKSREHS 480 HS* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd03819 | GT1_WavL_like | 8.0e-19 | 263 | 456 | 195 | + This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. | ||
| COG0438 | RfaG | 1.0e-19 | 184 | 476 | 319 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
| cd03808 | GT1_cap1E_like | 2.0e-22 | 279 | 467 | 189 | + This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. | ||
| cd03798 | GT1_wlbH_like | 3.0e-23 | 294 | 472 | 183 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
| cd03801 | GT1_YqgM_like | 1.0e-28 | 89 | 470 | 400 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005794 | Golgi apparatus |
| GO:0008152 | metabolic process |
| GO:0009058 | biosynthetic process |
| GO:0016740 | transferase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI19755.1 | 0 | 20 | 482 | 12 | 463 | unnamed protein product [Vitis vinifera] |
| GenBank | EAY73392.1 | 0 | 1 | 482 | 1 | 482 | hypothetical protein OsI_01273 [Oryza sativa Indica Group] |
| RefSeq | NP_001042653.1 | 0 | 1 | 482 | 1 | 482 | Os01g0262600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002281084.1 | 0 | 20 | 482 | 12 | 479 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002327680.1 | 0 | 1 | 482 | 1 | 481 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jjm_L | 0.0000000001 | 344 | 477 | 260 | 390 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_K | 0.0000000001 | 344 | 477 | 260 | 390 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_J | 0.0000000001 | 344 | 477 | 260 | 390 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_I | 0.0000000001 | 344 | 477 | 260 | 390 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_H | 0.0000000001 | 344 | 477 | 260 | 390 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
