| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os01g21034.1 |
| Family | CE8 |
| Protein Properties | Length: 427 Molecular Weight: 46148.8 Isoelectric Point: 9.1221 |
| Chromosome | Chromosome/Scaffold: 1 Start: 11741908 End: 11750709 |
| Description | pectin methylesterase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 116 | 411 | 0 |
| AVVAKDGSGGYTTVSAAVAAAPANSNKRYVIHIKAGAYMENVEVGKSKKNLMFIGDGIGKTVIKASRNVVDGSTTFRSATVAVVGNNFLARDLTIENSAG PSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIYGTIDFIFGNSAVVFQSCNLYARRPLPNQSNVYTAQGREDPNQNTGISIQKCKVAA ASDLLAVQSSFKTYLGRPWKQYSRTVFMQSELDSVVNPAGWLEWSGNFALDTLYYGEYQNTGPGASTSNRVKWKGYRVITSASEASTFTVGNFIDG | |||
| Full Sequence |
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| Protein Sequence Length: 427 Download |
| MTELSAAMTN QYTCLDGFDY KDGERVRHYM ESSIHHVSRM VSNSLAMAKK LPGAGGGGMT 60 PSSSSPDTAT QSESSETTQR QPFMGYGQMA NGFPKWVRPG DRRLLQAPAS SITPDAVVAK 120 DGSGGYTTVS AAVAAAPANS NKRYVIHIKA GAYMENVEVG KSKKNLMFIG DGIGKTVIKA 180 SRNVVDGSTT FRSATVAVVG NNFLARDLTI ENSAGPSKHQ AVALRVGADL SAFYRCSFVG 240 YQDTLYVHSL RQFFRECDIY GTIDFIFGNS AVVFQSCNLY ARRPLPNQSN VYTAQGREDP 300 NQNTGISIQK CKVAAASDLL AVQSSFKTYL GRPWKQYSRT VFMQSELDSV VNPAGWLEWS 360 GNFALDTLYY GEYQNTGPGA STSNRVKWKG YRVITSASEA STFTVGNFID GDVWLAGTSV 420 PFTVGL* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02713 | PLN02713 | 7.0e-168 | 2 | 426 | 431 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02484 | PLN02484 | 2.0e-169 | 1 | 426 | 427 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 4.0e-170 | 2 | 426 | 425 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02313 | PLN02313 | 1.0e-171 | 2 | 426 | 427 | + Pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 115 | 412 | 298 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005576 | extracellular region |
| GO:0005618 | cell wall |
| GO:0008150 | biological_process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC70505.1 | 0 | 1 | 426 | 159 | 565 | hypothetical protein OsI_01594 [Oryza sativa Indica Group] |
| GenBank | EEE54425.1 | 0 | 1 | 426 | 159 | 584 | hypothetical protein OsJ_01485 [Oryza sativa Japonica Group] |
| RefSeq | NP_001042866.1 | 0 | 1 | 426 | 1 | 426 | Os01g0312500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001146685.1 | 0 | 1 | 426 | 154 | 563 | hypothetical protein LOC100280285 [Zea mays] |
| RefSeq | XP_002455538.1 | 0 | 1 | 426 | 159 | 576 | hypothetical protein SORBIDRAFT_03g012830 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 109 | 426 | 2 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 112 | 426 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 2e-27 | 113 | 400 | 3 | 326 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 2e-27 | 113 | 400 | 3 | 326 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 2e-27 | 113 | 400 | 3 | 326 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO778758 | 425 | 2 | 426 | 0 |
| HO852920 | 424 | 4 | 427 | 0 |
| HO188466 | 228 | 200 | 427 | 0 |
| ES850416 | 317 | 87 | 403 | 0 |
| FC911216 | 299 | 93 | 391 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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