| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os01g21034.3 |
| Family | CE8 |
| Protein Properties | Length: 367 Molecular Weight: 38355.4 Isoelectric Point: 6.6681 |
| Chromosome | Chromosome/Scaffold: 1 Start: 11741384 End: 11748536 |
| Description | pectin methylesterase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 274 | 354 | 1.2e-27 |
| AVVAKDGSGGYTTVSAAVAAAPANSNKRYVIHIKAGAYMENVEVGKSKKNLMFIGDGIGKTVIKASRNVVDGSTTFRSATV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 367 Download |
| MPPLHAGRPG PLLVLLAVTL AAAAATAVGA SSDTAPFYPS AEEAAAAHCE GTLYPELCLS 60 TLADIPDLHT KSLPDVICGT VNRTKDAVAA TSYNCSHYIN SKYLTPRDRL AISDCMELLD 120 TTMDELQATT SDLESPAVAG GNNGSASMAA KRVTMDHVMT ELSAAMTNQY TCLDGFDYKD 180 GERVRHYMES SIHHVSRMVS NSLAMAKKLP GAGGGGMTPS SSSPDTATQS ESSETTQRQP 240 FMGYGQMANG FPKWVRPGDR RLLQAPASSI TPDAVVAKDG SGGYTTVSAA VAAAPANSNK 300 RYVIHIKAGA YMENVEVGKS KKNLMFIGDG IGKTVIKASR NVVDGSTTFR SATVGGLLLL 360 PADCTH* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02201 | PLN02201 | 5.0e-42 | 111 | 365 | 258 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 4.0e-43 | 34 | 354 | 334 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02933 | PLN02933 | 9.0e-45 | 70 | 355 | 295 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02484 | PLN02484 | 4.0e-47 | 43 | 353 | 312 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02313 | PLN02313 | 1.0e-62 | 39 | 357 | 322 | + Pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005576 | extracellular region |
| GO:0005618 | cell wall |
| GO:0005737 | cytoplasm |
| GO:0005886 | plasma membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC70505.1 | 0 | 1 | 354 | 1 | 335 | hypothetical protein OsI_01594 [Oryza sativa Indica Group] |
| GenBank | EEE54425.1 | 0 | 1 | 354 | 1 | 354 | hypothetical protein OsJ_01485 [Oryza sativa Japonica Group] |
| RefSeq | NP_001042866.1 | 0 | 159 | 354 | 1 | 196 | Os01g0312500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001146685.1 | 0 | 1 | 354 | 1 | 333 | hypothetical protein LOC100280285 [Zea mays] |
| RefSeq | XP_002455538.1 | 0 | 1 | 354 | 1 | 346 | hypothetical protein SORBIDRAFT_03g012830 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 4e-28 | 267 | 366 | 2 | 103 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 1e-24 | 270 | 366 | 1 | 100 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
