CAZyme Information

Basic Information
SpeciesOryza sativa
Cazyme IDLOC_Os01g43220.1
FamilyGH18
Protein PropertiesLength: 261 Molecular Weight: 29659.7 Isoelectric Point: 6.5969
ChromosomeChromosome/Scaffold: 1 Start: 24691392 End: 24697071
DescriptionGlycosyl hydrolase superfamily protein
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH18312511.1e-27
  DKGYDGVVLESWSRWAVYGVLDDSELRNRALQFVKHLGKTLPLTSSNLSTHHHLKLIYVVPAPRMKELNNQEFRPEDLLQLADSVDGFSLMTYDFSGPQN
  PGPSAPLSWIQYSLKTLLAAKGSASHGHSHMIFLGINFYGNDFLLSKGDGGNAITGRDFIYLLDKYKPSLQWDEKSSEHFFVYSDKGLRHAVFYPTLMSL
  SLRLDEAQDWGTGLSIWEIGQ
Full Sequence
Protein Sequence     Length: 261     Download
MNAGKYLYCC MSRYCYSYNC QFVIWLSVNR DKGYDGVVLE SWSRWAVYGV LDDSELRNRA    60
LQFVKHLGKT LPLTSSNLST HHHLKLIYVV PAPRMKELNN QEFRPEDLLQ LADSVDGFSL    120
MTYDFSGPQN PGPSAPLSWI QYSLKTLLAA KGSASHGHSH MIFLGINFYG NDFLLSKGDG    180
GNAITGRDFI YLLDKYKPSL QWDEKSSEHF FVYSDKGLRH AVFYPTLMSL SLRLDEAQDW    240
GTGLSIWEIG QGLDYFFDVL * 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00704Glyco_hydro_184.0e-883251189+
COG3858COG38581.0e-1757260214+
cd02874GH18_CFLE_spore_hydrolase2.0e-1826260248+
smart00636Glyco_181.0e-1830251250+
cd02876GH18_SI-CLP5.0e-11316260245+
Gene Ontology
GO TermDescription
GO:0003824catalytic activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005488binding
GO:0005975carbohydrate metabolic process
GO:0008152metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACG34172.1024260194430hydrolase, hydrolyzing O-glycosyl compounds [Zea mays]
GenBankEEC71106.1030260205435hypothetical protein OsI_02892 [Oryza sativa Indica Group]
GenBankEEE55003.1030260205435hypothetical protein OsJ_02637 [Oryza sativa Japonica Group]
RefSeqNP_001043596.1012601260Os01g0619800 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001130247.1024260194430hypothetical protein LOC100191341 [Zea mays]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3bxw_A2.99878e-4326260178393B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3bxw_B2.99878e-4326260178393B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GO791772232302610
FL831251225382610
HX143506202602610
AV931845202602610
JG906885220302480
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_013_00129.1
Arabidopsis lyrata352729
Arabidopsis thalianaAT4G01040.1
Brachypodium distachyonBradi2g43770.1
Brassica rapaBra000939
Carica papayaevm.model.supercontig_273.9
Capsella rubellaCarubv10001405m
Chlamydomonas reinhardtiiCre03.g200650.t1.1
Citrus clementinaCiclev10020231m
Citrus sinensisorange1.1g014108morange1.1g014001m
Cucumis sativusCucsa.259130.2Cucsa.259130.1
Eucalyptus grandisEucgr.E00067.1
Fragaria vescamrna19212.1-v1.0-hybrid
Glycine maxGlyma03g41760.2Glyma19g44401.1Glyma03g41760.1
Gossypium raimondiiGorai.008G124300.1
Linum usitatissimumLus10005946Lus10029447
Malus domesticaMDP0000223446MDP0000126058
Manihot esculentacassava4.1_001521m
Medicago truncatulaMedtr5g025480.1
Mimulus guttatusmgv1a010899m
Panicum virgatumPavirv00054484mPavirv00033212m
Physcomitrella patensPp1s162_65V6.1
Phaseolus vulgarisPhvul.006G111900.1
Picea abiesMA_557825g0010
Populus trichocarpaPotri.014G096700.1Potri.014G096700.2Potri.014G096700.4Potri.014G096700.3
Prunus persicappa006146m
Ricinus communis29742.m001446
Setaria italicaSi002099m
Selaginella moellendorffii249085240
Sorghum bicolorSb03g028160.1
Thellungiella halophilaThhalv10028671m
Vitis viniferaGSVIVT01027076001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny