| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os01g44090.1 |
| Family | CBM43 |
| Protein Properties | Length: 280 Molecular Weight: 27240.2 Isoelectric Point: 4.4722 |
| Chromosome | Chromosome/Scaffold: 1 Start: 25271543 End: 25273512 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 92 | 173 | 5.4e-36 |
| WCVASQSASPTALQVALDYACGYGADCSAIQPGGSCFNPDTVHDHASYAFNSYYQKNPVATSCDFGGTATITNTDPSSGSCQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 280 Download |
| MAYLGLLVLL LAFCGGAEHH GAEAAGDASA RGASARRGLA TVSVAKPSYP TVTTPMSAST 60 SPSTMPMSSS PSAFPSLATA GGGGGGGGGG SWCVASQSAS PTALQVALDY ACGYGADCSA 120 IQPGGSCFNP DTVHDHASYA FNSYYQKNPV ATSCDFGGTA TITNTDPSSG SCQYSASSGG 180 GQNMLPPPSP TTLPPPTPMT PTTPMTPTPT TPDTGTPIYG GSTTPPDYGS MSPPGGFGSN 240 SPPDYGDVGA APATMASGRA AVALAGVLIA TVSLMSMST* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 3.0e-22 | 91 | 161 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-35 | 91 | 167 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003674 | molecular_function |
| GO:0005623 | cell |
| GO:0008150 | biological_process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG38222.1 | 0 | 4 | 254 | 9 | 272 | GPI-anchored protein [Zea mays] |
| GenBank | EAY75064.1 | 0 | 1 | 279 | 1 | 281 | hypothetical protein OsI_02956 [Oryza sativa Indica Group] |
| RefSeq | NP_001043647.1 | 0 | 1 | 279 | 1 | 279 | Os01g0631500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001131448.1 | 0 | 15 | 275 | 24 | 294 | hypothetical protein LOC100192780 [Zea mays] |
| RefSeq | NP_001142053.1 | 0 | 4 | 254 | 9 | 284 | hypothetical protein LOC100274209 [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 1e-20 | 90 | 174 | 11 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
