y
Basic Information | |
---|---|
Species | Oryza sativa |
Cazyme ID | LOC_Os01g44340.1 |
Family | CE8 |
Protein Properties | Length: 326 Molecular Weight: 35288.5 Isoelectric Point: 7.3768 |
Chromosome | Chromosome/Scaffold: 1 Start: 25442405 End: 25444195 |
Description | pectinesterase 11 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 43 | 319 | 0 |
VTVDQSGKGDHRRIQDAIDAAPANDSSRTVIRIKPGVYREKVVVDKPYVTLTGTSATSTVIAWNESWVSDESPTVSVLASDFVAKRLTFQNTFGDSAPAV AVRVAGDRAAFYGCRFVSFQDTLLDETGRHYYRGCYVQGATDFIFGNGRALFDKCHLHSTSPDGAGGAFTAQQRSSESEETGYSFVGCKLTGLGAGTSIL GRPWGPYSRVVFALTYMSSTVRPQGWDDWGDPSNQRTAFYGQYQCYGDGSKTDGRVAWSHDLTQAEAAPFITKAWVD |
Full Sequence |
---|
Protein Sequence Length: 326 Download |
MPMPLYGVVN SPCRSHCRAA ATLLVSVSLL CSCFAIAMPS VVVTVDQSGK GDHRRIQDAI 60 DAAPANDSSR TVIRIKPGVY REKVVVDKPY VTLTGTSATS TVIAWNESWV SDESPTVSVL 120 ASDFVAKRLT FQNTFGDSAP AVAVRVAGDR AAFYGCRFVS FQDTLLDETG RHYYRGCYVQ 180 GATDFIFGNG RALFDKCHLH STSPDGAGGA FTAQQRSSES EETGYSFVGC KLTGLGAGTS 240 ILGRPWGPYS RVVFALTYMS STVRPQGWDD WGDPSNQRTA FYGQYQCYGD GSKTDGRVAW 300 SHDLTQAEAA PFITKAWVDG QQWLR* 360 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02304 | PLN02304 | 8.0e-78 | 45 | 325 | 299 | + probable pectinesterase | ||
PLN02773 | PLN02773 | 2.0e-83 | 38 | 324 | 308 | + pectinesterase | ||
PLN02665 | PLN02665 | 4.0e-88 | 42 | 324 | 294 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 9.0e-107 | 37 | 325 | 308 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 6.0e-180 | 37 | 325 | 291 | + putative pectinesterase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0006464 | cellular protein modification process |
GO:0008150 | biological_process |
GO:0008152 | metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF05574.2 | 0 | 1 | 325 | 1 | 325 | Os01g0634600 [Oryza sativa Japonica Group] |
EMBL | CAN79458.1 | 0 | 40 | 325 | 43 | 326 | hypothetical protein [Vitis vinifera] |
GenBank | EEC71149.1 | 0 | 1 | 325 | 1 | 330 | hypothetical protein OsI_02978 [Oryza sativa Indica Group] |
RefSeq | NP_001043660.1 | 0 | 38 | 325 | 1 | 293 | Os01g0634600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002458207.1 | 0 | 41 | 325 | 11 | 301 | hypothetical protein SORBIDRAFT_03g028930 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 39 | 325 | 7 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1.4013e-45 | 45 | 325 | 7 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 3e-25 | 24 | 317 | 17 | 361 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 2e-21 | 40 | 312 | 5 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-21 | 40 | 312 | 5 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |