| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os01g52250.2 |
| Family | GT5 |
| Protein Properties | Length: 973 Molecular Weight: 109572 Isoelectric Point: 5.9168 |
| Chromosome | Chromosome/Scaffold: 1 Start: 30030997 End: 30041476 |
| Description | starch synthase 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 478 | 960 | 0 |
| HIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIQSYFDGNLFSNNVWTGTVEGLPVYFIEPQHPSKFFWRAQ YYGEHDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFSSARICFTCHNFEYQGTAPAPDLSYCGLDVEQLDRPDRMQDNAHG RINVAKGGIVYSNIVTTVSPTYALEVRSEGGRGLQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLYSEDASQPLV ACITRLVPQKGLHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGVADQFQKNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMRYGSV PIVRQTGGLCDSVFDFDDETIPVELRNGFTFARTDEQDLSSCLERAFSYYSRKPMVWKQLVQKDMQIDFSWDSPASQYENLYQ | |||
| Full Sequence |
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| Protein Sequence Length: 973 Download |
| MAACGAAAAE YSALLSLSCG PITRRRFAVS CRARPPGNLS AQQKKKRGKN IAPKQRSSNA 60 KLLLTTEENG QLPSTSLRTS MERPQKSTSS EDDTNGAISQ IDEKIAAIGN EQQERSKDKH 120 FESDFQLEDF GEMIQNMEKN ILLLNQARLQ AIEDVDKILT EKEALQKKVD TLEMNLSKAL 180 ATKGNINTDI PGDHLEKFTK EILIESALSG GNPAHLCESP LFMELTVLKE ENMLLKADAQ 240 FLKAKIVEFA ETEEFLFKLE KERSLLDATV RELEARFLVA QTDIWKVVPL QYDVWMEKVE 300 NLQHMLGCLK NHVEKYAALL DQHDDLHDKI DELEASLKEG KTSEFSPYVV ELLQQKLKAA 360 KSHHQAGHQE TNTHIQVYQQ LTEEFQDNLG KLIEESGRLE HSANSMPSEF WSHILLMIDG 420 WFLERKIPNT DARMLREMAW KRDDRICEAY FACKGAKESD VMETFLKLSL SGNSSGLHIV 480 HIAAEMAPVA KVGGLADVVA GLGKALQTKG HLVEIVLPKY DCMQLDQITN LKVLDVVIQS 540 YFDGNLFSNN VWTGTVEGLP VYFIEPQHPS KFFWRAQYYG EHDDFKRYSY FSRAALELLY 600 QSGKKIDIIH CHDWQTAFVA PLYWDIYATR GFSSARICFT CHNFEYQGTA PAPDLSYCGL 660 DVEQLDRPDR MQDNAHGRIN VAKGGIVYSN IVTTVSPTYA LEVRSEGGRG LQDTLKMHSR 720 KFVGILNGID TGTWNPSTDR FLAVQYSATD LQGKAANKAF LRKQLGLYSE DASQPLVACI 780 TRLVPQKGLH LIRHAIYKTA ELGGQFVLLG SSPVPHIQRE FEGVADQFQK NNNIRLILKY 840 DEALSHCIYA ASDMFIIPSM FEPCGLTQMI AMRYGSVPIV RQTGGLCDSV FDFDDETIPV 900 ELRNGFTFAR TDEQDLSSCL ERAFSYYSRK PMVWKQLVQK DMQIDFSWDS PASQYENLYQ 960 SAVAQARGAA QT* 1020 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0297 | GlgA | 1.0e-130 | 479 | 964 | 505 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PLN02939 | PLN02939 | 0 | 23 | 972 | 957 | + transferase, transferring glycosyl groups | ||
| TIGR02095 | glgA | 0 | 478 | 962 | 489 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PRK00654 | glgA | 0 | 478 | 965 | 491 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 478 | 961 | 490 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0009058 | biosynthetic process |
| GO:0009536 | plastid |
| GO:0009987 | cellular process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM49812.1 | 0 | 10 | 972 | 10 | 962 | putative soluble starch synthase IV-1 [Oryza sativa Indica Group] |
| GenBank | ACY56241.1 | 0 | 10 | 972 | 10 | 962 | soluble starch synthase IV-1 [Oryza sativa Japonica Group] |
| GenBank | ACY56242.1 | 0 | 10 | 972 | 10 | 962 | soluble starch synthase IV-1 [Oryza sativa Japonica Group] |
| DDBJ | BAD87398.1 | 0 | 10 | 972 | 10 | 975 | glycogen (starch) synthase-like [Oryza sativa Japonica Group] |
| RefSeq | NP_001044091.1 | 0 | 10 | 972 | 10 | 972 | Os01g0720600 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 477 | 959 | 1 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 477 | 959 | 1 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 477 | 959 | 1 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 477 | 959 | 1 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 477 | 959 | 1 | 473 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO851132 | 331 | 552 | 882 | 0 |
| CB622719 | 296 | 556 | 851 | 0 |
| GO882681 | 278 | 555 | 832 | 0 |
| CB660919 | 324 | 538 | 861 | 0 |
| GO882681 | 46 | 835 | 880 | 4e-18 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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