| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os01g54900.1 |
| Family | GT19 |
| Protein Properties | Length: 476 Molecular Weight: 52759.1 Isoelectric Point: 7.1148 |
| Chromosome | Chromosome/Scaffold: 1 Start: 31568908 End: 31575611 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT19 | 46 | 427 | 0 |
| VFVVAGEVSGDSLASRLMASLRALSPVPVRFAGVGGELMRNKGLQSLFPMEEISIMGLWELLPHIYNIKRKIEDTADAAVLFQPHAVVTVDSKGFSFRLL KQLKCRYNQVARPLHVHYVAPSFWAWKDGERRLAKLHNFVDHLLCILPFEEEICRLNGLPATYVGHPLLDDAIGLNMEKELSSVNSMHQRSGEDFRQEHE ISPDSTIITILPGSRMQEVARMLPIFLQTVQHLSHTFNELSLVIPVAPHRDVRVYVDNVVRSGPFPVVLITGETLKERYDAFNASRAALCTSGTAVMELM LAKLPCVVAYRAHFITECLIHLRKKIDFISLPNILLNSPIVPEILFGACTAENLAAKLSEVICNDEARQLQVESAEQLLEML | |||
| Full Sequence |
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| Protein Sequence Length: 476 Download |
| MLSLRIAAAS RLRGLLGGGA ATGARTRAFS YGRVVDAAAR DGELRVFVVA GEVSGDSLAS 60 RLMASLRALS PVPVRFAGVG GELMRNKGLQ SLFPMEEISI MGLWELLPHI YNIKRKIEDT 120 ADAAVLFQPH AVVTVDSKGF SFRLLKQLKC RYNQVARPLH VHYVAPSFWA WKDGERRLAK 180 LHNFVDHLLC ILPFEEEICR LNGLPATYVG HPLLDDAIGL NMEKELSSVN SMHQRSGEDF 240 RQEHEISPDS TIITILPGSR MQEVARMLPI FLQTVQHLSH TFNELSLVIP VAPHRDVRVY 300 VDNVVRSGPF PVVLITGETL KERYDAFNAS RAALCTSGTA VMELMLAKLP CVVAYRAHFI 360 TECLIHLRKK IDFISLPNIL LNSPIVPEIL FGACTAENLA AKLSEVICND EARQLQVESA 420 EQLLEMLYEP IKQRGGLFQE ELHNSSLPSN IYSPSTIAAL TVLYTDNHQQ AVHQN* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 6.0e-38 | 47 | 429 | 396 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 7.0e-63 | 46 | 436 | 395 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 2.0e-81 | 46 | 427 | 382 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| PRK00025 | lpxB | 2.0e-102 | 44 | 427 | 384 | + lipid-A-disaccharide synthase; Reviewed | ||
| COG0763 | LpxB | 7.0e-105 | 44 | 427 | 384 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005575 | cellular_component |
| GO:0005975 | carbohydrate metabolic process |
| GO:0006629 | lipid metabolic process |
| GO:0008152 | metabolic process |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28885.1 | 0 | 38 | 464 | 2 | 427 | unnamed protein product [Vitis vinifera] |
| GenBank | EEC71491.1 | 0 | 1 | 475 | 1 | 475 | hypothetical protein OsI_03760 [Oryza sativa Indica Group] |
| RefSeq | NP_001044267.1 | 0 | 1 | 475 | 1 | 475 | Os01g0752600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001140462.1 | 0 | 27 | 475 | 22 | 471 | hypothetical protein LOC100272521 [Zea mays] |
| RefSeq | XP_002458499.1 | 0 | 27 | 469 | 2 | 445 | hypothetical protein SORBIDRAFT_03g034785 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lipid IVA biosynthesis | LIPIDADISACCHARIDESYNTH-RXN | EC-2.4.1.182 | lipid-A-disaccharide synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CB664616 | 252 | 225 | 476 | 0 |
| JG864023 | 277 | 128 | 403 | 0 |
| DV519136 | 256 | 29 | 283 | 0 |
| DT652350 | 249 | 29 | 276 | 0 |
| DR962527 | 241 | 29 | 268 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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