| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os01g55820.1 |
| Family | CBM43 |
| Protein Properties | Length: 208 Molecular Weight: 20173.5 Isoelectric Point: 6.7114 |
| Chromosome | Chromosome/Scaffold: 1 Start: 32145824 End: 32147365 |
| Description | plasmodesmata callose-binding protein 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 24 | 107 | 1.3e-33 |
| WCVCRPDVAEAALQKALDYACGHGADCAPVTPSGSCYSPNNVAAHCSYAANSYFQRNSQAKGATCDFGGAATLSSTDPSSGTCK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 208 Download |
| MATRLLLLLL LLLGMSLKGS EGAWCVCRPD VAEAALQKAL DYACGHGADC APVTPSGSCY 60 SPNNVAAHCS YAANSYFQRN SQAKGATCDF GGAATLSSTD PSSGTCKYPA TASAAGTSTG 120 TGTAGAGTGT GTSTSTSTST SSPGSSTAAT GTPIMGGTFA TPIGGGASGP TTSALNPDSS 180 EAPSPSLGRH LLLTCIASML LSNFLLA* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-22 | 24 | 95 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 9.0e-39 | 24 | 108 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005575 | cellular_component |
| GO:0005886 | plasma membrane |
| GO:0008150 | biological_process |
| GO:0016020 | membrane |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC71533.1 | 0 | 1 | 113 | 1 | 113 | hypothetical protein OsI_03847 [Oryza sativa Indica Group] |
| RefSeq | NP_001044338.1 | 0 | 1 | 207 | 1 | 207 | Os01g0763900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001056023.1 | 1e-39 | 19 | 182 | 16 | 203 | Os05g0512600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151015.1 | 0 | 6 | 200 | 4 | 183 | glucan endo-1,3-beta-glucosidase 1 [Zea mays] |
| RefSeq | XP_002458540.1 | 0 | 18 | 206 | 16 | 187 | hypothetical protein SORBIDRAFT_03g035410 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 2e-21 | 22 | 110 | 11 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
