| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os01g56510.1 |
| Family | GH3 |
| Protein Properties | Length: 665 Molecular Weight: 72349.1 Isoelectric Point: 6.9461 |
| Chromosome | Chromosome/Scaffold: 1 Start: 32580710 End: 32586143 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 105 | 340 | 0 |
| LSTRLGIPMIYGIDAVHGNNNVYNATLFPHNIGLGATRDPDLVRRIGEATALEVRATGIPYTFAPCIAVCRDPRWGRCYESYSEDHRVVQQMTDIILGLQ GDIPINHTKGVPYIAGKDKVAACAKHFVGDGGTHNGINENNTITDEHGLLGIHMPPYYDSIIKGVATVMVSYSSLNGVKMHANHDLVTGYLKSKLHFRGF VISDWLGIDRITSPPDANYTYSVQAGINAGIDMVMV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 665 Download |
| MICPKISLAC VLLLLWFTST GDAAYMKYLD PKQPTNTRIK DLISRMTLAE KIGQMTQIER 60 GVASADVMKN YFIGSVLSGG GSVPAPQATP AVWVNMVNEF QKGALSTRLG IPMIYGIDAV 120 HGNNNVYNAT LFPHNIGLGA TRDPDLVRRI GEATALEVRA TGIPYTFAPC IAVCRDPRWG 180 RCYESYSEDH RVVQQMTDII LGLQGDIPIN HTKGVPYIAG KDKVAACAKH FVGDGGTHNG 240 INENNTITDE HGLLGIHMPP YYDSIIKGVA TVMVSYSSLN GVKMHANHDL VTGYLKSKLH 300 FRGFVISDWL GIDRITSPPD ANYTYSVQAG INAGIDMVMV PFNYTQYIDD VTSLVKKGII 360 NMSRIDDAVR RILRVKFIMG LFENPLADLS FADQLGKKEH RDLAREAVRK SLVLLKNGNS 420 PNQQFLPLPK KARSILVAGS HASNLGYQCG GWSIEWIGGS GDITVGTTIL EAIKSTVADS 480 THVVYSENPD ESFMKNNDFS FAIVVVGERT YAETTGDDPE LTILDPGTDT IRTVCSTAKC 540 AVVIISGRPV VIEPYLPMME ALVAAWLPGT EGQGVADVLF GDYGFTGKLP RTWFKSVDQL 600 PMNVGDLHYD PLFPFGFGLT INSSQPGFSG ADRLRDRNGG MIYVVLSLVL SVILMHASGI 660 GRTK* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 4.0e-43 | 34 | 620 | 667 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 4.0e-45 | 412 | 621 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 9.0e-84 | 31 | 620 | 667 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 1.0e-84 | 46 | 444 | 413 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 9.0e-91 | 47 | 375 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005575 | cellular_component |
| GO:0005618 | cell wall |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAR14129.1 | 0 | 6 | 620 | 6 | 619 | exo-beta-glucanase [Lilium longiflorum] |
| GenBank | EEC71555.1 | 0 | 1 | 661 | 378 | 1028 | hypothetical protein OsI_03907 [Oryza sativa Indica Group] |
| GenBank | EEE55456.1 | 0 | 26 | 661 | 1 | 626 | hypothetical protein OsJ_03617 [Oryza sativa Japonica Group] |
| RefSeq | NP_001044387.1 | 0 | 1 | 661 | 1 | 661 | Os01g0771900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002456420.1 | 0 | 12 | 655 | 31 | 674 | hypothetical protein SORBIDRAFT_03g035970 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1j8v_A | 0 | 25 | 625 | 2 | 603 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1iex_A | 0 | 25 | 625 | 2 | 603 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1iew_A | 0 | 25 | 625 | 2 | 603 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1iev_A | 0 | 25 | 625 | 2 | 603 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1ieq_A | 0 | 25 | 625 | 2 | 603 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
