| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os01g56570.1 |
| Family | GT14 |
| Protein Properties | Length: 420 Molecular Weight: 44932.5 Isoelectric Point: 5.401 |
| Chromosome | Chromosome/Scaffold: 1 Start: 32611406 End: 32613200 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 82 | 319 | 0 |
| LAYYISGGHGDSVRMTRLLKAVYHPRNRYLLHLDAGAGAYERARLAGYARSERAFLEYGNVHVVGKGDPVDGRGPSAVAAVLRGAAVLLRVGAEWDWLVT LGASDYPLVTPDDLLYAFSSVRRGLSFIDHRMDSGGAEAVVVDQNLLQSTNAEISFSSGQRAKPDAFELFRGSPRPILSRDFVEYCVVAPDNLPRTLLLY FSNSLSPMEFYFQTVMANSAQFRNSTVNHNLRHTVAQD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 420 Download |
| MHLSGARLRI PTWCTMPHGS WLLQTCSPSA ALASLAVVTT SLLIIGYASS SFFLGAPAYE 60 YDDVVEAAAA VPRRGPGYPP VLAYYISGGH GDSVRMTRLL KAVYHPRNRY LLHLDAGAGA 120 YERARLAGYA RSERAFLEYG NVHVVGKGDP VDGRGPSAVA AVLRGAAVLL RVGAEWDWLV 180 TLGASDYPLV TPDDLLYAFS SVRRGLSFID HRMDSGGAEA VVVDQNLLQS TNAEISFSSG 240 QRAKPDAFEL FRGSPRPILS RDFVEYCVVA PDNLPRTLLL YFSNSLSPME FYFQTVMANS 300 AQFRNSTVNH NLRHTVAQDG GAPTSQGADG QQASRYDAMV GSGAAFAGAF GDDDDALLQR 360 IDEEVLRRPL DGVTPGEWCV ADGEEGTDNE CSVGGDIDVV RHGAKGRKLA TLVVDLVGA* 420 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 3.0e-48 | 82 | 326 | 245 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 7.0e-76 | 83 | 417 | 340 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0009058 | biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABR16364.1 | 0 | 52 | 418 | 51 | 411 | unknown [Picea sitchensis] |
| RefSeq | NP_001044392.1 | 0 | 16 | 419 | 1 | 404 | Os01g0772500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001131298.1 | 0 | 20 | 418 | 4 | 400 | hypothetical protein LOC100192611 [Zea mays] |
| RefSeq | XP_002310932.1 | 0 | 42 | 418 | 4 | 383 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002458575.1 | 0 | 23 | 418 | 4 | 401 | hypothetical protein SORBIDRAFT_03g035990 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.00000000007 | 77 | 373 | 83 | 389 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.00000000007 | 77 | 373 | 83 | 389 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.00000000007 | 77 | 373 | 83 | 389 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.00000000007 | 77 | 373 | 83 | 389 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.00000000008 | 77 | 373 | 83 | 389 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EE176111 | 200 | 82 | 281 | 0 |
| DR787068 | 161 | 82 | 242 | 0 |
| ES809218 | 303 | 82 | 379 | 0 |
| HO371733 | 315 | 82 | 391 | 0 |
| DR943045 | 242 | 82 | 318 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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