| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os01g65460.2 |
| Family | GH35 |
| Protein Properties | Length: 920 Molecular Weight: 102511 Isoelectric Point: 8.3467 |
| Chromosome | Chromosome/Scaffold: 1 Start: 37994513 End: 38001584 |
| Description | beta-galactosidase 10 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 113 | 416 | 0 |
| LIISGRRRLLISTSIHYPRSVPEMWPKLVAEAKDGGADCVETYVFWNGHEPAQGQYYFEERFDLVRFAKIVKDAGLYMILRIGPFVAAEWTFGGVPVWLH YAPGTVFRTNNEPFKSHMKRFTTYIVDMMKKEQFFASQGGHIILAQVENEYGDMEQAYGAGAKPYAMWAASMALAQNTGVPWIMCQQYDAPDPVINTCNS FYCDQFKPNSPTKPKFWTENWPGWFQTFGESNPHRPPEDVAFSVARFFGKGGSLQNYYVYHGGTNFGRTTGGPFITTSYDYDAPIDEYGLRRLPKWAHLR DLHK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 920 Download |
| MGRPHRRRDC GHGAAHRERC RIQSKQLHST VPTPPARRLP PHAILYHHHH HRVVLAHTPY 60 RPPPSTAAMA GASSYFSLRR LLLLLLPLVP LLGATTAAAA GANSSVTYDH RSLIISGRRR 120 LLISTSIHYP RSVPEMWPKL VAEAKDGGAD CVETYVFWNG HEPAQGQYYF EERFDLVRFA 180 KIVKDAGLYM ILRIGPFVAA EWTFGGVPVW LHYAPGTVFR TNNEPFKSHM KRFTTYIVDM 240 MKKEQFFASQ GGHIILAQVE NEYGDMEQAY GAGAKPYAMW AASMALAQNT GVPWIMCQQY 300 DAPDPVINTC NSFYCDQFKP NSPTKPKFWT ENWPGWFQTF GESNPHRPPE DVAFSVARFF 360 GKGGSLQNYY VYHGGTNFGR TTGGPFITTS YDYDAPIDEY GLRRLPKWAH LRDLHKSIKL 420 GEHTLLYGNS SFVSLGPQQE ADVYTDQSGG CVAFLSNVDS EKDKVVTFQS RSYDLPAWSV 480 SILPDCKNVA FNTAKVRSQT LMMDMVPANL ESSKVDGWSI FREKYGIWGN IDLVRNGFVD 540 HINTTKDSTD YLWYTTSFDV DGSHLAGGNH VLHIESKGHA VQAFLNNELI GSAYGNGSKS 600 NFSVEMPVNL RAGKNKLSLL SMTVGLQNGG PMYEWAGAGI TSVKISGMEN RIIDLSSNKW 660 EYKIGLEGEY YSLFKADKGK DIRWMPQSEP PKNQPMTWYK VNVDVPQGDD PVGLDMQSMG 720 KGLAWLNGNA IGRYWPRISP VSDRCTSSCD YRGTFSPNKC RRGCGQPTQR WYHVPRSWFH 780 PSGNTLVIFE EKGGDPTKIT FSRRTVASVC SFVSEHYPSI DLESWDRNTQ NDGRDAAKVQ 840 LSCPKGKSIS SVKFVSFGNP SGTCRSYQQG SCHHPNSISV VEKACLNMNG CTVSLSDEGF 900 GEDLCPGVTK TLAIEADCS* 960 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13364 | BetaGal_dom4_5 | 0.003 | 539 | 615 | 78 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| COG1874 | LacA | 3.0e-14 | 128 | 427 | 359 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02140 | Gal_Lectin | 3.0e-19 | 841 | 918 | 82 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 6.0e-140 | 128 | 418 | 306 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 104 | 919 | 826 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005488 | binding |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAG95687.1 | 0 | 1 | 919 | 1 | 919 | unnamed protein product [Oryza sativa Japonica Group] |
| GenBank | EEC71891.1 | 0 | 103 | 919 | 35 | 851 | hypothetical protein OsI_04635 [Oryza sativa Indica Group] |
| RefSeq | NP_001044964.1 | 0 | 69 | 919 | 1 | 851 | Os01g0875500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151478.1 | 0 | 104 | 919 | 27 | 844 | beta-galactosidase [Zea mays] |
| RefSeq | XP_002456725.1 | 0 | 102 | 919 | 25 | 843 | hypothetical protein SORBIDRAFT_03g041450 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0 | 112 | 809 | 14 | 591 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 1e-34 | 115 | 401 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 1e-34 | 115 | 401 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
