CAZyme Information

Basic Information
SpeciesOryza sativa
Cazyme IDLOC_Os01g66700.1
FamilyGH20
Protein PropertiesLength: 527 Molecular Weight: 59024.1 Isoelectric Point: 5.2032
ChromosomeChromosome/Scaffold: 1 Start: 38740059 End: 38745918
Descriptionbeta-hexosaminidase 3
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH201684770
  SDTPRFPYRGLLIDTSRHYLPVTVIKKVIDTMAYSKLNVLHWHIVDAQSFPIEIPSYPKLWNGSYSFSERYTTSDAVDIVRYAENRGVNVMAEIDVPGHA
  LSWGVGYPSLWPSDSCKEPLDVSNNFTFGVIDGILSDFSKVFKFKFVHLGGDEVNTSCWTATPHIKKWLDDNQMNVSDAYRYFVLRSQKLAISHGYDVIN
  WEETFNNFGDKLDRRTVVHNWLGEDVAPKVVAAGLRCIVSNQDKWYLDHLDATWEGFYTNEPLKGIDDPEQQSLVIGGEVCMWGEQIDASDIEQTIWPRA
  AAAAERLWTP
Full Sequence
Protein Sequence     Length: 527     Download
MAQALSLGLL LAFLAIQSCI AIELTDHIDL WPMPTSVSHG TQRLYVSKDI TMSMEGSTYP    60
DGKGILKDAF QRVVDLMKLN HVVDGANPSS FVLTGVNVVV HSPEDELKFG VDESYNLSVP    120
TAGYPLRVQI EAQTVFGALH ALQTFSQLCY FDFTSKLIEL ISAPWRISDT PRFPYRGLLI    180
DTSRHYLPVT VIKKVIDTMA YSKLNVLHWH IVDAQSFPIE IPSYPKLWNG SYSFSERYTT    240
SDAVDIVRYA ENRGVNVMAE IDVPGHALSW GVGYPSLWPS DSCKEPLDVS NNFTFGVIDG    300
ILSDFSKVFK FKFVHLGGDE VNTSCWTATP HIKKWLDDNQ MNVSDAYRYF VLRSQKLAIS    360
HGYDVINWEE TFNNFGDKLD RRTVVHNWLG EDVAPKVVAA GLRCIVSNQD KWYLDHLDAT    420
WEGFYTNEPL KGIDDPEQQS LVIGGEVCMW GEQIDASDIE QTIWPRAAAA AERLWTPIEK    480
IAEDPRLVTS RLARFRCLLN QRGVAAAPVA GYGRTAPYEP GPCVRQ* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd02742GH20_hexosaminidase4.0e-60175475322+
cd06570GH20_chitobiase-like_12.0e-71173477320+
cd06563GH20_chitobiase-like1.0e-72173480354+
pfam00728Glyco_hydro_206.0e-105173477335+
cd06562GH20_HexA_HexB-like1.0e-157173503350+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004563beta-N-acetylhexosaminidase activity
GO:0005618cell wall
GO:0005886plasma membrane
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAT77374.102852627527putative beta-N-acetylhexosaminidase [Oryza sativa Japonica Group]
GenBankACN36154.102652625525unknown [Zea mays]
GenBankEEC79230.102852627527hypothetical protein OsI_19972 [Oryza sativa Indica Group]
RefSeqNP_001045052.1015261526Os01g0891000 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001055557.102852631531Os05g0415700 [Oryza sativa (japonica cultivar-group)]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2gk1_H0305127501B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa
PDB2gk1_F0305127501B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa
PDB2gk1_D0305127501B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa
PDB2gk1_B0305127501B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa
PDB2gk1_G0305091495B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa
Metabolic Pathways
Pathway NameReactionECProtein Name
chitin degradation IIRXN-12625EC-3.2.1.52β-L-N-acetylhexosaminidase
chitin degradation IIRXN-12626EC-3.2.1.52β-L-N-acetylhexosaminidase
Signal Peptide
Cleavage Site
21
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CK2104943212025220
HO8039823981325270
GO8454713201464650
CV7348973681064730
DW1191583081754820
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_022_00071.4Aquca_022_00071.3Aquca_022_00071.2Aquca_022_00071.1Aquca_010_00682.1
Aquca_004_00645.1
Arabidopsis lyrata475658485946470561
Arabidopsis thalianaAT1G65590.1AT3G55260.1AT1G05590.1
Brachypodium distachyonBradi2g57420.1Bradi2g25310.1Bradi2g37460.1Bradi3g44607.1Bradi1g69660.1
Bradi1g23740.1
Brassica rapaBra004121Bra014765Bra032460
Carica papayaevm.model.supercontig_197.26
Capsella rubellaCarubv10020116mCarubv10016974mCarubv10011603m
Chlamydomonas reinhardtiig11709.t1
Citrus clementinaCiclev10014808mCiclev10031174mCiclev10031139mCiclev10031669mCiclev10033772m
Ciclev10019509mCiclev10024601m
Citrus sinensisorange1.1g008945morange1.1g013337morange1.1g008821morange1.1g014971morange1.1g044344m
orange1.1g007722morange1.1g007610m
Cucumis sativusCucsa.165600.1Cucsa.178740.1Cucsa.165600.2.144.314Cucsa.165600.2.144.314Cucsa.177460.1
Cucsa.165600.2.312.421Cucsa.165600.2.312.421
Eucalyptus grandisEucgr.G02896.1Eucgr.L01476.1Eucgr.K02799.2Eucgr.K02799.1Eucgr.K02799.3
Eucgr.K02798.2Eucgr.K02798.1
Fragaria vescamrna26730.1-v1.0-hybridmrna02330.1-v1.0-hybrid
Glycine maxGlyma18g52290.1Glyma02g10570.1Glyma10g43710.1Glyma20g38400.1Glyma08g17200.1
Glyma08g16970.1Glyma15g41986.1
Gossypium raimondiiGorai.002G136400.2Gorai.002G136400.1Gorai.011G246500.1Gorai.012G068200.1Gorai.012G068200.2
Gorai.002G136400.3Gorai.012G068200.3Gorai.007G264000.1
Linum usitatissimumLus10003292Lus10030323Lus10022251Lus10030348Lus10007899
Malus domesticaMDP0000798095MDP0000262060.270.444MDP0000262060.270.444MDP0000564236MDP0000262060.174.257
MDP0000262060.174.257
Manihot esculentacassava4.1_033827mcassava4.1_033064mcassava4.1_004406mcassava4.1_007813mcassava4.1_023099m
cassava4.1_021615m
Medicago truncatulaMedtr2g062560.1
Mimulus guttatusmgv1a004365mmgv1a003720mmgv1a007861mmgv1a003512mmgv1a023788m
Oryza sativaLOC_Os05g34320.2LOC_Os05g34320.1LOC_Os05g02510.1LOC_Os05g34320.3LOC_Os07g38790.1
LOC_Os03g11980.1
Panicum virgatumPavirv00023753mPavirv00005093mPavirv00062644mPavirv00067910mPavirv00063863m
Pavirv00062646mPavirv00001875mPavirv00056279mPavirv00062645m.258.396Pavirv00062645m.258.396
Pavirv00060770mPavirv00016511mPavirv00054866mPavirv00049460mPavirv00062645m.174.254
Pavirv00062645m.174.254
Physcomitrella patensPp1s70_132V6.1Pp1s3_199V6.1
Phaseolus vulgarisPhvul.008G015400.1Phvul.007G010100.1Phvul.005G045300.1Phvul.005G043200.1
Picea abiesMA_177334g0010MA_271570g0010MA_92690g0010.179.289MA_92690g0010.179.289MA_92690g0010.297.429
MA_92690g0010.297.429
Populus trichocarpaPotri.008G079400.2Potri.008G079400.1Potri.010G211000.2Potri.010G211000.1Potri.010G211000.4
Potri.010G211000.3Potri.008G079400.5Potri.008G079400.3Potri.008G079400.4Potri.001G232800.1
Potri.001G232600.1
Prunus persicappa003880mppa002753m
Ricinus communis29929.m00450328180.m00037729616.m00021628180.m00037634575.m000024
47890.m000013
Setaria italicaSi001028mSi021738mSi024695mSi021693mSi029311m
Si034794m
Selaginella moellendorffii117332429308422139422155445016
422160429325441789422260
Sorghum bicolorSb09g020420.2Sb09g020420.1Sb09g001670.1Sb02g037280.1Sb01g042640.1
Thellungiella halophilaThhalv10018379mThhalv10010264mThhalv10007181mThhalv10007179m
Vitis viniferaGSVIVT01016639001GSVIVT01006264001GSVIVT01004010001GSVIVT01006000001
Volvox carteriVocar20013124m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)