| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os01g67220.2 |
| Family | GH1 |
| Protein Properties | Length: 484 Molecular Weight: 55294.8 Isoelectric Point: 4.9621 |
| Chromosome | Chromosome/Scaffold: 1 Start: 39004988 End: 39010626 |
| Description | beta glucosidase 42 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 13 | 472 | 0 |
| GDFPDGFVFGVATSAYQIEGARREGGKGDNIWDVFTENKERILDGSSGEVAVDHYHRYKEDIELMASLGFRAYRFSISWPRIFPDGLGKNVNEQGVAFYN DLINFMIEKGIEPYATLYHWDLPHNLQQTVGGWLSDKIVEYFALYAEACFANFGDRVKHWITINEPLQTAVNGYGIGHFAPGGCEGETARCYLAAHYQIL AHAAAVDVYRRKFKAVQGGEVGLVVDCEWAEPFSEKTEDQVAAERRLDFQLGWYLDPIYFGDYPESMRQRLGDDLPTFSEKDKEFIRNKIDFVGINHYTS RFIAHHQDPEDIYFYRVQQVERIEKWNTGEKIGERAASEWLFIVPWGLRKLLNYAAKRYGNPVIYVTENGMDEEDDQSATLDQVLNDTTRVGYFKGYLAS VAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKNGLSRHPKASARWFSRFLK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 484 Download |
| MGSTGRDAEV TRGDFPDGFV FGVATSAYQI EGARREGGKG DNIWDVFTEN KERILDGSSG 60 EVAVDHYHRY KEDIELMASL GFRAYRFSIS WPRIFPDGLG KNVNEQGVAF YNDLINFMIE 120 KGIEPYATLY HWDLPHNLQQ TVGGWLSDKI VEYFALYAEA CFANFGDRVK HWITINEPLQ 180 TAVNGYGIGH FAPGGCEGET ARCYLAAHYQ ILAHAAAVDV YRRKFKAVQG GEVGLVVDCE 240 WAEPFSEKTE DQVAAERRLD FQLGWYLDPI YFGDYPESMR QRLGDDLPTF SEKDKEFIRN 300 KIDFVGINHY TSRFIAHHQD PEDIYFYRVQ QVERIEKWNT GEKIGERAAS EWLFIVPWGL 360 RKLLNYAAKR YGNPVIYVTE NGMDEEDDQS ATLDQVLNDT TRVGYFKGYL ASVAQAIKDG 420 ADVRGYFAWS FLDNFEWAMG YTKRFGIVYV DYKNGLSRHP KASARWFSRF LKGDDAENKA 480 DMN* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02998 | PLN02998 | 4.0e-117 | 11 | 473 | 477 | + beta-glucosidase | ||
| PLN02814 | PLN02814 | 4.0e-121 | 11 | 473 | 480 | + beta-glucosidase | ||
| COG2723 | BglB | 8.0e-145 | 15 | 467 | 460 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| TIGR03356 | BGL | 1.0e-171 | 16 | 467 | 452 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 0 | 11 | 473 | 466 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005829 | cytosol |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABW76289.1 | 0 | 9 | 479 | 20 | 488 | beta-glucosidase G4 [Medicago truncatula] |
| GenBank | EEC71957.1 | 0 | 1 | 483 | 1 | 472 | hypothetical protein OsI_04787 [Oryza sativa Indica Group] |
| RefSeq | NP_001045089.1 | 0 | 1 | 483 | 1 | 483 | Os01g0897600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001146483.1 | 0 | 1 | 474 | 1 | 474 | hypothetical protein LOC100280071 [Zea mays] |
| RefSeq | XP_002456785.1 | 0 | 1 | 483 | 126 | 608 | hypothetical protein SORBIDRAFT_03g042690 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gnr_A | 0 | 10 | 472 | 12 | 487 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 3gnp_A | 0 | 10 | 472 | 12 | 487 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 3gno_A | 0 | 10 | 472 | 12 | 487 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2rgm_B | 0 | 10 | 472 | 15 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2rgm_A | 0 | 10 | 472 | 15 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DR970424 | 290 | 1 | 290 | 0 |
| FL918803 | 239 | 235 | 473 | 0 |
| JG798933 | 251 | 103 | 353 | 0 |
| CO439814 | 247 | 191 | 437 | 0 |
| JG958633 | 249 | 166 | 414 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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