| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os01g69220.1 |
| Family | GT47 |
| Protein Properties | Length: 438 Molecular Weight: 48884.1 Isoelectric Point: 9.2696 |
| Chromosome | Chromosome/Scaffold: 1 Start: 40230199 End: 40233220 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 62 | 375 | 0 |
| LRVFMYDLPRRFHVGMMDASASGFPAWPPSAGGIRRQHSVEYWMMASLQGGGGGGNGSSSEEGREAVRVTDPDAAEAFFVPFFSSLSFNVHGRNMTDPET EADRLLQVELMEILWKSKYWQRSAGRDHVIPMHHPNAFRFLRDMVNASILIVADFGRYTKELASLRKDVVAPYVHVVDSFLNDDPPDPFDDRPTLLFFRG RTVRKDEGKIRAKLAKILKGKDGVRFEDSLATGEGIKTSTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSSRIELPFEDEIDYSEFSLFFSVEE ALRPDYLLNQLRQI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 438 Download |
| MASPSSRAVA VGGALLLLLV FAVPTTFLYL TSAPAASSPS LLLNLKPFGA RCAPAAAAAP 60 PLRVFMYDLP RRFHVGMMDA SASGFPAWPP SAGGIRRQHS VEYWMMASLQ GGGGGGNGSS 120 SEEGREAVRV TDPDAAEAFF VPFFSSLSFN VHGRNMTDPE TEADRLLQVE LMEILWKSKY 180 WQRSAGRDHV IPMHHPNAFR FLRDMVNASI LIVADFGRYT KELASLRKDV VAPYVHVVDS 240 FLNDDPPDPF DDRPTLLFFR GRTVRKDEGK IRAKLAKILK GKDGVRFEDS LATGEGIKTS 300 TEGMRSSKFC LHPAGDTPSS CRLFDAIVSH CVPVIVSSRI ELPFEDEIDY SEFSLFFSVE 360 EALRPDYLLN QLRQIQKTKW VEIWSKLKNV SHHYEFQNPP RKGDAVNMIW RQVKHKVPAV 420 NLAIHRNRRL KIPDWWG* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 6.0e-60 | 62 | 375 | 322 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005623 | cell |
| GO:0008150 | biological_process |
| GO:0008152 | metabolic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY77012.1 | 0 | 1 | 437 | 1 | 416 | hypothetical protein OsI_04969 [Oryza sativa Indica Group] |
| RefSeq | NP_001045226.1 | 0 | 1 | 437 | 1 | 437 | Os01g0921300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001152546.1 | 0 | 35 | 437 | 32 | 427 | exostosin-like [Zea mays] |
| RefSeq | NP_176908.2 | 0 | 16 | 436 | 9 | 429 | exostosin family protein [Arabidopsis thaliana] |
| RefSeq | XP_002456855.1 | 0 | 42 | 437 | 43 | 432 | hypothetical protein SORBIDRAFT_03g044100 [Sorghum bicolor] |
