| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os01g70180.2 |
| Family | GT47 |
| Protein Properties | Length: 390 Molecular Weight: 44162.6 Isoelectric Point: 5.7577 |
| Chromosome | Chromosome/Scaffold: 1 Start: 40615700 End: 40617229 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 22 | 317 | 0 |
| KLKVFVYEMPRKYNLNLLAKDSRCLQHMFAAEIFMHQFLLSSPVRTLDPEEADWFYTPAYTTCDLTPQGFPLPFRAPRIMRSAVRYVAATWPYWNRTDGA DHFFLAPHDFGACFHYQEERAIERGILPVLRRATLVQTFGQRHHPCLQPGSITVPPYADPRKMEAHRISPATPRSIFVYFRGLFYDMGNDPEGGYYARGA RASVWENFKDNPLFDISTEHPATYYEDMQRAIFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWGEISVFVAEEDVPRLDTILASV | |||
| Full Sequence |
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| Protein Sequence Length: 390 Download |
| MDVDVDCAGK GGDVLEDDPT GKLKVFVYEM PRKYNLNLLA KDSRCLQHMF AAEIFMHQFL 60 LSSPVRTLDP EEADWFYTPA YTTCDLTPQG FPLPFRAPRI MRSAVRYVAA TWPYWNRTDG 120 ADHFFLAPHD FGACFHYQEE RAIERGILPV LRRATLVQTF GQRHHPCLQP GSITVPPYAD 180 PRKMEAHRIS PATPRSIFVY FRGLFYDMGN DPEGGYYARG ARASVWENFK DNPLFDISTE 240 HPATYYEDMQ RAIFCLCPLG WAPWSPRLVE AVVFGCIPVI IADDIVLPFA DAIPWGEISV 300 FVAEEDVPRL DTILASVPLD EVIRKQRLLA SPAMKQAVLF HQPARPGDAF HQILNGLARK 360 LPHPKGVFLE PGEKGIDWDQ GLENDLKPW* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 3.0e-82 | 22 | 317 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005794 | Golgi apparatus |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG43504.1 | 0 | 8 | 389 | 39 | 420 | secondary cell wall-related glycosyltransferase family 47 [Zea mays] |
| GenBank | EAY77054.1 | 0 | 8 | 389 | 41 | 422 | hypothetical protein OsI_05011 [Oryza sativa Indica Group] |
| GenBank | EEE55930.1 | 0 | 8 | 389 | 41 | 401 | hypothetical protein OsJ_04615 [Oryza sativa Japonica Group] |
| RefSeq | NP_001045262.1 | 0 | 8 | 389 | 41 | 422 | Os01g0926400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002459015.1 | 0 | 8 | 389 | 34 | 415 | hypothetical protein SORBIDRAFT_03g044510 [Sorghum bicolor] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO868810 | 329 | 35 | 363 | 0 |
| GO846508 | 325 | 66 | 390 | 0 |
| GO872051 | 326 | 32 | 357 | 0 |
| DV972021 | 300 | 35 | 334 | 0 |
| EX131890 | 308 | 24 | 331 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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