| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os01g71820.1 |
| Family | GH17 |
| Protein Properties | Length: 319 Molecular Weight: 34270.6 Isoelectric Point: 4.7711 |
| Chromosome | Chromosome/Scaffold: 1 Start: 41597270 End: 41598692 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 6 | 315 | 0 |
| GVCYGMNGDNLPSQSEVVQLYKSNGIGAMRIYSPDQKALDALRGSGIAVIIDVGGIGAVANLANNPSAAADWVRDNVQAYWPNVIIRYIAVGNELGPGDM GTILPAMQNVYDALVSAGLSNSIKVSTAVRMDAITDSFPPSHGVFRPDLQQFMVPIAQFLANTMSPLLANVYPYFAYRDNPRDIPLNYATFQPGTTVRDN DSGLTYTNLFSAMVDAVYAALEKAGEPGVRVVVSESGWPSAGGFAANVENARNHNQGVIDNVKNGTPKRPGQLETYVFAMFNENQKPGDETERHFGLFYP DKTPVYPITF | |||
| Full Sequence |
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| Protein Sequence Length: 319 Download |
| MGGVHGVCYG MNGDNLPSQS EVVQLYKSNG IGAMRIYSPD QKALDALRGS GIAVIIDVGG 60 IGAVANLANN PSAAADWVRD NVQAYWPNVI IRYIAVGNEL GPGDMGTILP AMQNVYDALV 120 SAGLSNSIKV STAVRMDAIT DSFPPSHGVF RPDLQQFMVP IAQFLANTMS PLLANVYPYF 180 AYRDNPRDIP LNYATFQPGT TVRDNDSGLT YTNLFSAMVD AVYAALEKAG EPGVRVVVSE 240 SGWPSAGGFA ANVENARNHN QGVIDNVKNG TPKRPGQLET YVFAMFNENQ KPGDETERHF 300 GLFYPDKTPV YPITFPPN* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-156 | 5 | 315 | 313 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005618 | cell wall |
| GO:0005773 | vacuole |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD88028.1 | 0 | 1 | 318 | 6 | 323 | endo-1,3-beta-glucanase [Oryza sativa Japonica Group] |
| GenBank | EAY77193.1 | 0 | 1 | 318 | 1 | 318 | hypothetical protein OsI_05162 [Oryza sativa Indica Group] |
| GenBank | EAZ14817.1 | 0 | 1 | 318 | 1 | 318 | hypothetical protein OsJ_04744 [Oryza sativa Japonica Group] |
| RefSeq | NP_001045384.1 | 0 | 2 | 318 | 100 | 416 | Os01g0946500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001045385.1 | 0 | 1 | 318 | 1 | 318 | Os01g0946600 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghs_B | 0 | 6 | 315 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 6 | 315 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 2cyg_A | 0 | 6 | 315 | 2 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 6 | 315 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 6 | 315 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CT855783 | 317 | 1 | 315 | 0 |
| CT848213 | 320 | 1 | 313 | 0 |
| HX191066 | 275 | 1 | 274 | 0 |
| DR739897 | 308 | 6 | 313 | 0 |
| CT848213 | 105 | 220 | 315 | 0.005 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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