PlantCAZyme

CAZyme Information

Basic Information
Species	Oryza sativa
Cazyme ID	LOC_Os01g71860.1
Family	GH17
Protein Properties	Length: 633 Molecular Weight: 67635.3 Isoelectric Point: 5.1785
Chromosome	Chromosome/Scaffold: 1 Start: 41629299 End: 41631914
Description	Glycosyl hydrolase superfamily protein
View CDS

External Links
NCBI Taxonomy
CAZyDB

External Links

NCBI Taxonomy

CAZyDB

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
GH17	6	313	0
GVCYGVLGDNLPPRSEVVQLLKSQGIGAMRIYYPDKEALDALRGSGIAIIVDVGDSGAVANLASNPSAAGDWVRDNVEAYWPSVIIRYITVGNELPAGDM GLILPAMQNVHKALVSAGLSSSIKVSTAIKMDVVANTFPPSHGVFRPDVQQFMAPIARFLANTVSPLLVNVYPYVSYRENPRDISLNYATFQPGTTVRDS DSGLTYTNLFNAMVDAVYAALEKAGTPNVRIAVSETGWPSAGGFAATAENAMNHNQGVIDNVKNGTPKRPGPLETYVFAMFNENQQTGDETRRHFGLFNP DKTPAYPI
GH17	324	630	0
IGVCYGMVGNDLPSRSEVVQMYVSLGINRMRIYNPDREALDALRNSGIDLILDAGGFDTVSYLAASSSNAASWVHDNISPYYPAVNIKYIAVGNEVVGGT TESILPAMRNVNSALAAAGIGGIKVSTAVKSDVIANSYPPSAGVFAYPYMNGIAQYLASTGAPLLANVYPYFAYAGNPREISLNYATFQPGTTVRDDGNG LTYTNLFDAMVDCIYAALEKADAGNVRVVVSESGWPSAEGIGASMDNARAYNQGLIDHVGRGTPKRPGQMEAYIFAMFNENQKTGAATERHFGLFYPNKS PVYQIAF

Full Sequence
Protein Sequence Length: 633 Download
MGAVNGVCYG VLGDNLPPRS EVVQLLKSQG IGAMRIYYPD KEALDALRGS GIAIIVDVGD 60 SGAVANLASN PSAAGDWVRD NVEAYWPSVI IRYITVGNEL PAGDMGLILP AMQNVHKALV 120 SAGLSSSIKV STAIKMDVVA NTFPPSHGVF RPDVQQFMAP IARFLANTVS PLLVNVYPYV 180 SYRENPRDIS LNYATFQPGT TVRDSDSGLT YTNLFNAMVD AVYAALEKAG TPNVRIAVSE 240 TGWPSAGGFA ATAENAMNHN QGVIDNVKNG TPKRPGPLET YVFAMFNENQ QTGDETRRHF 300 GLFNPDKTPA YPITPYPRPA VQSIGVCYGM VGNDLPSRSE VVQMYVSLGI NRMRIYNPDR 360 EALDALRNSG IDLILDAGGF DTVSYLAASS SNAASWVHDN ISPYYPAVNI KYIAVGNEVV 420 GGTTESILPA MRNVNSALAA AGIGGIKVST AVKSDVIANS YPPSAGVFAY PYMNGIAQYL 480 ASTGAPLLAN VYPYFAYAGN PREISLNYAT FQPGTTVRDD GNGLTYTNLF DAMVDCIYAA 540 LEKADAGNVR VVVSESGWPS AEGIGASMDN ARAYNQGLID HVGRGTPKRP GQMEAYIFAM 600 FNENQKTGAA TERHFGLFYP NKSPVYQIAF SN*

Full Sequence

Protein Sequence Length: 633 Download

MGAVNGVCYG VLGDNLPPRS EVVQLLKSQG IGAMRIYYPD KEALDALRGS GIAIIVDVGD    60
SGAVANLASN PSAAGDWVRD NVEAYWPSVI IRYITVGNEL PAGDMGLILP AMQNVHKALV    120
SAGLSSSIKV STAIKMDVVA NTFPPSHGVF RPDVQQFMAP IARFLANTVS PLLVNVYPYV    180
SYRENPRDIS LNYATFQPGT TVRDSDSGLT YTNLFNAMVD AVYAALEKAG TPNVRIAVSE    240
TGWPSAGGFA ATAENAMNHN QGVIDNVKNG TPKRPGPLET YVFAMFNENQ QTGDETRRHF    300
GLFNPDKTPA YPITPYPRPA VQSIGVCYGM VGNDLPSRSE VVQMYVSLGI NRMRIYNPDR    360
EALDALRNSG IDLILDAGGF DTVSYLAASS SNAASWVHDN ISPYYPAVNI KYIAVGNEVV    420
GGTTESILPA MRNVNSALAA AGIGGIKVST AVKSDVIANS YPPSAGVFAY PYMNGIAQYL    480
ASTGAPLLAN VYPYFAYAGN PREISLNYAT FQPGTTVRDD GNGLTYTNLF DAMVDCIYAA    540
LEKADAGNVR VVVSESGWPS AEGIGASMDN ARAYNQGLID HVGRGTPKRP GQMEAYIFAM    600
FNENQKTGAA TERHFGLFYP NKSPVYQIAF SN* 

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
COG5309	COG5309	0.007	401	622	231	+ Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism]
pfam00332	Glyco_hydro_17	2.0e-146	324	630	313	+ Glycosyl hydrolases family 17.
pfam00332	Glyco_hydro_17	1.0e-148	6	314	311	+ Glycosyl hydrolases family 17.

Gene Ontology
GO Term	Description
GO:0003824	catalytic activity
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005488	binding
GO:0005618	cell wall
GO:0005773	vacuole

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
GenBank	EAY77202.1	0	1	632	1	632	hypothetical protein OsI_05171 [Oryza sativa Indica Group]
GenBank	EAY77211.1	0	1	462	1	458	hypothetical protein OsI_05182 [Oryza sativa Indica Group]
GenBank	EAY77211.1	0	325	629	6	314	hypothetical protein OsI_05182 [Oryza sativa Indica Group]
RefSeq	NP_001045386.1	0	1	314	1	314	Os01g0946700 [Oryza sativa (japonica cultivar-group)]
RefSeq	NP_001045388.1	0	1	632	1	632	Os01g0947000 [Oryza sativa (japonica cultivar-group)]

Annotations - PDB Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
PDB	1ghs_B	0	324	630	1	306	A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities
PDB	1ghs_B	0	6	313	2	304	A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities
PDB	1ghs_A	0	324	630	1	306	A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities
PDB	1ghs_A	0	6	313	2	304	A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities
PDB	2cyg_A	0	324	630	1	312	A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome

Hydropathy

EST Download unfiltered results here

Hit

Length

Start

End

EValue

CT855783

316

314

CT855783

305

325

624

DR739897

306

323

628

DR739897

308

313

DR739798

296

323

618

Orthologous Group
Species	ID
Aquilegia coerulea	Aquca_014_00709.1	Aquca_052_00037.1	Aquca_014_00710.1	Aquca_014_00708.1	Aquca_014_00706.1
	Aquca_004_00503.1	Aquca_023_00065.1	Aquca_077_00005.1	Aquca_049_00226.1	Aquca_004_00503.2
	Aquca_049_00225.1
Arabidopsis lyrata	329886	348799	877890	486168	910094
	486169	881625	488942	910095	910074
	899139	316691	856124	488959
Arabidopsis thaliana	AT4G16260.1	AT1G77780.1	AT3G57240.1	AT5G20330.1	AT3G57270.1
	AT5G20340.1	AT5G20390.1	AT3G57260.1	AT1G33220.1	AT5G20560.1
	AT1G77790.1
Brachypodium distachyon	Bradi2g60490.1	Bradi2g43056.1	Bradi2g60441.1	Bradi2g27140.1	Bradi4g36190.1
	Bradi2g21142.1	Bradi2g60536.1	Bradi2g60542.1	Bradi1g15295.1	Bradi2g22226.1
	Bradi2g60557.1	Bradi2g22224.1	Bradi2g22222.1	Bradi2g60497.1	Bradi2g52565.1
Brassica rapa	Bra033549	Bra007313	Bra003273	Bra007315	Bra020110
	Bra002311	Bra002295	Bra020100	Bra014635	Bra014638
	Bra014636	Bra015873	Bra014640	Bra008336	Bra014637
	Bra007314
Carica papaya	evm.model.supercontig_69.53	evm.model.supercontig_56.98	evm.model.supercontig_49.125	evm.model.supercontig_120.8	evm.model.supercontig_120.1
	evm.model.supercontig_120.2	evm.model.supercontig_203.3	evm.model.supercontig_49.124	evm.model.supercontig_1107.1	evm.model.supercontig_179.28
Capsella rubella	Carubv10005163m	Carubv10020584m	Carubv10017567m	Carubv10018497m	Carubv10003621m
	Carubv10009618m	Carubv10007632m	Carubv10017587m	Carubv10017580m	Carubv10021473m
	Carubv10003855m
Citrus clementina	Ciclev10031945m	Ciclev10017983m	Ciclev10029843m	Ciclev10005195m	Ciclev10005181m
	Ciclev10012099m	Ciclev10005316m	Ciclev10007126m	Ciclev10006922m	Ciclev10006479m
	Ciclev10001717m	Ciclev10005324m	Ciclev10006634m	Ciclev10006696m
Citrus sinensis	orange1.1g048613m	orange1.1g048190m	orange1.1g019260m	orange1.1g018955m	orange1.1g018966m
	orange1.1g019014m	orange1.1g019755m	orange1.1g043874m	orange1.1g025491m	orange1.1g046047m
	orange1.1g044365m	orange1.1g039749m	orange1.1g043422m	orange1.1g043818m	orange1.1g043597m
Cucumis sativus	Cucsa.167580.1	Cucsa.333910.1	Cucsa.356950.1	Cucsa.274690.1	Cucsa.333930.2
	Cucsa.333930.1	Cucsa.274680.1
Eucalyptus grandis	Eucgr.B03315.1	Eucgr.L02807.1	Eucgr.F03742.1
Fragaria vesca	mrna14817.1-v1.0-hybrid	mrna05145.1-v1.0-hybrid	mrna21959.1-v1.0-hybrid	mrna05671.1-v1.0-hybrid.230.538	mrna05671.1-v1.0-hybrid.230.538
	mrna12482.1-v1.0-hybrid	mrna14292.1-v1.0-hybrid	mrna14815.1-v1.0-hybrid	mrna17857.1-v1.0-hybrid
Glycine max	Glyma03g28870.1	Glyma12g02410.1	Glyma11g10080.1	Glyma16g21710.1	Glyma16g21740.2
	Glyma11g10070.1	Glyma16g21640.1	Glyma09g04191.2	Glyma09g04191.1	Glyma06g11390.1
	Glyma19g31580.1	Glyma15g15200.1	Glyma03g28850.1	Glyma19g31590.2	Glyma19g31590.1
	Glyma09g04200.2	Glyma11g10091.1	Glyma16g21700.2	Glyma15g15211.1
Gossypium raimondii	Gorai.010G003600.1	Gorai.010G003500.1	Gorai.008G159300.1	Gorai.009G074100.1	Gorai.006G134700.1
	Gorai.006G079600.1	Gorai.009G242500.1	Gorai.006G079400.1	Gorai.004G257700.1	Gorai.006G134600.1
	Gorai.010G003700.1	Gorai.008G159300.2.125.311	Gorai.008G159300.2.125.311
Linum usitatissimum	Lus10029149	Lus10013016	Lus10039233	Lus10014110	Lus10016883
	Lus10002807	Lus10031037	Lus10019801	Lus10014108	Lus10014109
	Lus10027479	Lus10010091	Lus10027860	Lus10035423	Lus10019800
	Lus10031035	Lus10031033	Lus10031036
Malus domestica	MDP0000256573	MDP0000327191	MDP0000918948	MDP0000250870	MDP0000576756
	MDP0000298027	MDP0000265527	MDP0000570395	MDP0000563788	MDP0000796925
	MDP0000834943	MDP0000416440	MDP0000880357	MDP0000820007	MDP0000282861.136.425
	MDP0000282861.136.425	MDP0000163547	MDP0000127517	MDP0000247130.244.451	MDP0000247130.244.451
	MDP0000521510
Manihot esculenta	cassava4.1_010983m	cassava4.1_009799m	cassava4.1_023576m
Medicago truncatula	Medtr4g076470.1	Medtr2g034440.1	Medtr4g076430.1	Medtr4g076440.1	Medtr2g034470.1
	Medtr7g081370.1	Medtr7g081350.1	Medtr4g076570.1	Medtr4g076490.1	Medtr4g076500.1
	Medtr2g034480.1	Medtr4g076250.1
Mimulus guttatus	mgv1a009451m	mgv1a009099m	mgv1a009184m	mgv1a009606m	mgv1a020557m
	mgv1a009249m	mgv1a009371m	mgv1a026276m
Oryza sativa	LOC_Os01g71340.1	LOC_Os01g71400.1	LOC_Os01g71860.1.324.630	LOC_Os01g71860.1.324.630	LOC_Os01g71930.1
	LOC_Os01g71380.1	LOC_Os01g51570.1	LOC_Os01g71410.1	LOC_Os09g36280.1	LOC_Os01g58730.1
	LOC_Os05g41610.1	LOC_Os01g71830.1	LOC_Os01g71810.1	LOC_Os01g71820.1	LOC_Os05g31140.1
	LOC_Os01g71680.1	LOC_Os01g71350.1	LOC_Os05g31140.3	LOC_Os05g31140.2	LOC_Os01g71474.1
	LOC_Os01g71670.1	LOC_Os01g71690.3	LOC_Os01g71690.2	LOC_Os01g71650.1	LOC_Os03g22530.1
	LOC_Os03g56130.1	LOC_Os07g41014.1
Panicum virgatum	Pavirv00070670m	Pavirv00014109m	Pavirv00036938m	Pavirv00057359m	Pavirv00029945m
	Pavirv00002244m	Pavirv00000755m	Pavirv00069874m	Pavirv00015614m	Pavirv00007129m
	Pavirv00070558m	Pavirv00053670m	Pavirv00025674m	Pavirv00022362m	Pavirv00016955m
	Pavirv00026418m	Pavirv00033312m	Pavirv00058859m.81.297	Pavirv00058859m.81.297	Pavirv00052769m
	Pavirv00052474m	Pavirv00000958m	Pavirv00064841m	Pavirv00000252m	Pavirv00057392m
	Pavirv00015902m	Pavirv00070799m	Pavirv00070030m
Physcomitrella patens	Pp1s26_166V6.1
Phaseolus vulgaris	Phvul.011G177000.1	Phvul.011G077900.1	Phvul.001G128500.1	Phvul.009G256500.1	Phvul.009G256400.2
	Phvul.009G256400.1
Picea abies	MA_202096g0010	MA_8691g0010.97.408	MA_8691g0010.97.408	MA_28098g0010	MA_10266495g0010
	MA_475809g0010	MA_10432716g0010	MA_10431609g0010	MA_10432716g0030	MA_10337257g0010
	MA_8465203g0010	MA_795943g0010	MA_934111g0010
Populus trichocarpa	Potri.001G255100.1	Potri.016G057400.1	Potri.006G048100.1	Potri.016G057600.1	Potri.005G172000.1
	Potri.009G050300.1	Potri.016G135900.1	Potri.010G142800.1	Potri.T167100.1	Potri.010G142800.2
	Potri.002G089200.1	Potri.006G046100.1	Potri.001G255100.2	Potri.009G050400.2	Potri.009G050400.1
	Potri.010G088500.1
Prunus persica	ppa020503m	ppa024457m	ppa018225m	ppa007999m	ppa026579m
	ppa025430m	ppa023845m	ppa1027220m	ppa017239m	ppa008126m
	ppa015919m	ppa017802m	ppa024064m	ppa024759m	ppa020193m
Ricinus communis	29676.m001666	29908.m006191	30169.m006474	29631.m001023	30053.m000106
	30147.m013731.50.284	30147.m013731.50.284
Setaria italica	Si002182m	Si002306m	Si028122m	Si022625m	Si002065m
	Si022492m	Si003802m	Si000491m	Si004560m	Si005124m
	Si022606m	Si024558m	Si022731m	Si022614m	Si002273m
	Si022794m	Si022791m
Selaginella moellendorffii	233178
Sorghum bicolor	Sb03g045460.1	Sb03g045450.1	Sb08g019670.1	Sb02g030930.1	Sb09g024320.1
	Sb03g037270.1	Sb03g045630.1	Sb09g018730.2	Sb09g018730.1	Sb03g045510.1
	Sb09g025890.1	Sb09g018730.4	Sb09g018730.3	Sb03g045490.1	Sb09g018750.1
	Sb03g045480.1	Sb03g045520.1
Thellungiella halophila	Thhalv10025628m	Thhalv10003127m	Thhalv10019644m	Thhalv10015407m	Thhalv10007971m
	Thhalv10003126m	Thhalv10015636m	Thhalv10015248m	Thhalv10008546m
Vitis vinifera	GSVIVT01013131001	GSVIVT01033545001.34.314	GSVIVT01033545001.34.314	GSVIVT01033542001	GSVIVT01033536001
	GSVIVT01031542001.119.325	GSVIVT01031542001.119.325	GSVIVT01033538001	GSVIVT01033545001.379.572	GSVIVT01033545001.379.572

Orthologous Group

Species

Aquilegia coerulea