| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os02g03690.1 |
| Family | GH14 |
| Protein Properties | Length: 802 Molecular Weight: 88227 Isoelectric Point: 6.812 |
| Chromosome | Chromosome/Scaffold: 2 Start: 1539488 End: 1548149 |
| Description | beta-amylase 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH14 | 322 | 727 | 0 |
| ASLPMGIINSHCQLIDPEGIRAELMHLKSLNVDGVIVDCWWGIVEAWIPHKYEWSGYRDLFGIIKEFKLKVQAVLSFHGSGETGSGGVSLPKWVMEIAQE NQDVFFTDREGRRNMECLSWGIDKERVLRGRTGIEAYFDFMRSFHMEFRNLTEEGLISAIEIGLGVSGELKYPSCPERMGWRYPGIGEFQCYDRYMQKNL RQAALSRGHLFWARGPDNAGYYNSRPHETGFFCDGGDYDSYYGRFFLNWYSGILIDHVDQVLSLATLAFDGVETVVKIPSIYWWYRTASHAAELTAGFYN PTNRDGYSPVFRMLKKHSVILKFVCYGPEFTIQENNEAFADPEGLTWQVMNAAWDHGLSISVESALPCLDGEMYSQILDTAKPRHDPDRHHVSFFAYRQL PSFLLQ | |||
| Full Sequence |
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| Protein Sequence Length: 802 Download |
| MSLKHPHSPV LDGDPPPHRR PRGLVSTPPP PAVAADTSPS PSPSPAAPPP RRRGGGGGGG 60 EREREREKER TKLRERHRRA ITSRMLSGLR QHGNFPLPAR ADMNDVLAAL ARAAGWTVHP 120 DGTTFRASSQ PLHPPTPQSP GIFHVNSVET PSFTSVLNSY AIGTPLDSQA SMLQTDDSLS 180 PSSLDSVVVA DQSIKNEKYG NSDSVSSLNC LENHQPVELE VVLPPPLAAL LVCGSTVVQL 240 MGGSMAGSAD GHPEEEQRER SGDGRVGACA GAAAGAEPVP AAVHSSSSHA VSAVIAAIGS 300 LTRASAALAG DYTRTPYIPV YASLPMGIIN SHCQLIDPEG IRAELMHLKS LNVDGVIVDC 360 WWGIVEAWIP HKYEWSGYRD LFGIIKEFKL KVQAVLSFHG SGETGSGGVS LPKWVMEIAQ 420 ENQDVFFTDR EGRRNMECLS WGIDKERVLR GRTGIEAYFD FMRSFHMEFR NLTEEGLISA 480 IEIGLGVSGE LKYPSCPERM GWRYPGIGEF QCYDRYMQKN LRQAALSRGH LFWARGPDNA 540 GYYNSRPHET GFFCDGGDYD SYYGRFFLNW YSGILIDHVD QVLSLATLAF DGVETVVKIP 600 SIYWWYRTAS HAAELTAGFY NPTNRDGYSP VFRMLKKHSV ILKFVCYGPE FTIQENNEAF 660 ADPEGLTWQV MNAAWDHGLS ISVESALPCL DGEMYSQILD TAKPRHDPDR HHVSFFAYRQ 720 LPSFLLQRDV CFSELGNFVK CMHDGSLIKI VVRVRTIIAH QSGSSALDVL MQRLTVLCIR 780 GVSTYPIKII RSRYLTTVIA L* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 7.0e-16 | 81 | 174 | 99 | + beta-amylase | ||
| PLN02705 | PLN02705 | 1.0e-29 | 81 | 215 | 136 | + beta-amylase | ||
| PLN02801 | PLN02801 | 7.0e-144 | 317 | 743 | 438 | + beta-amylase | ||
| PLN02705 | PLN02705 | 0 | 305 | 743 | 441 | + beta-amylase | ||
| PLN02905 | PLN02905 | 0 | 311 | 748 | 444 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0003824 | catalytic activity |
| GO:0005488 | binding |
| GO:0005575 | cellular_component |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY84334.1 | 0 | 103 | 215 | 1 | 113 | hypothetical protein OsI_05709 [Oryza sativa Indica Group] |
| GenBank | EAY84334.1 | 0 | 301 | 751 | 114 | 563 | hypothetical protein OsI_05709 [Oryza sativa Indica Group] |
| GenBank | EAZ21608.1 | 0 | 215 | 801 | 2 | 588 | hypothetical protein OsJ_05236 [Oryza sativa Japonica Group] |
| RefSeq | XP_002451472.1 | 0 | 71 | 224 | 47 | 200 | hypothetical protein SORBIDRAFT_04g002450 [Sorghum bicolor] |
| RefSeq | XP_002451472.1 | 0 | 301 | 670 | 192 | 563 | hypothetical protein SORBIDRAFT_04g002450 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdq_A | 0 | 317 | 743 | 11 | 442 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1wdp_A | 0 | 317 | 743 | 11 | 442 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1q6c_A | 0 | 317 | 743 | 11 | 442 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 317 | 743 | 11 | 442 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1wds_A | 0 | 317 | 743 | 11 | 442 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| EB439624 | 285 | 364 | 646 | 0 |
| DR734378 | 239 | 497 | 735 | 0 |
| CJ908248 | 235 | 365 | 597 | 0 |
| JG649066 | 276 | 362 | 635 | 0 |
| CJ908112 | 228 | 367 | 592 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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