| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os02g03870.1 |
| Family | GH3 |
| Protein Properties | Length: 649 Molecular Weight: 69270.7 Isoelectric Point: 8.2011 |
| Chromosome | Chromosome/Scaffold: 2 Start: 1643966 End: 1648808 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 122 | 357 | 0 |
| MATRLGIPMIYGIDAVHGHGNVYKATIFPHNVGLGCTRDPDLAKRIGAAVAAEVRATGIPYVFAPCVAVCRDPRWGRCYESFSEDPRVVQRMSSIISGFQ GEIPPGGRRGVPFVSGGRPSVAACSKHYVGDGGTTRGMNENNTVATLRELMTVHMPPYYSAVAQGVSTVMVSFSSWNGVKMHANHFLITDFLKSKLRFRG FVISDWQGLDRITTPAHADYMLSIKLGIMAGIDMVM | |||
| Full Sequence |
|---|
| Protein Sequence Length: 649 Download |
| MGLLRRGSSG GGAVLVVVVC VGCIAATAMA AAAGGGGGGG ECPKYKDSKQ PLNKRIDDLL 60 RRMTLAEKIG QMSQIERENA TFDVMRNYFI GSVLSGGGSV PAAQASPAAW VSMVNEMQRG 120 AMATRLGIPM IYGIDAVHGH GNVYKATIFP HNVGLGCTRD PDLAKRIGAA VAAEVRATGI 180 PYVFAPCVAV CRDPRWGRCY ESFSEDPRVV QRMSSIISGF QGEIPPGGRR GVPFVSGGRP 240 SVAACSKHYV GDGGTTRGMN ENNTVATLRE LMTVHMPPYY SAVAQGVSTV MVSFSSWNGV 300 KMHANHFLIT DFLKSKLRFR GFVISDWQGL DRITTPAHAD YMLSIKLGIM AGIDMVMIPF 360 TYTEFIDDLA ALVKNGTIPM SRIDDAVRRI LRVKFTMGLF ERPYADLSLA GELGKQEHRD 420 LARDAVRKSL VLLKNGKPGD APLLPLPKRA RSILVAGAHA DDLGSQCGGW TITWQGLAGN 480 DLTAGGTTIL DGIRRAVDAA TEVVFAEAPD AGFMRRNAGR FDAAVVVVGE PPYAETLGDN 540 LNLTIPAPGP SVIQNVCGGG VRCVVVVVSG RPLVIEPYMD AIDALVAAWL PGTEGQGVSD 600 VLFGDYEFTG KLARTWFRSV EQLPMNVGDE HYDPLFPFGF GLETRKAN* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 2.0e-35 | 51 | 626 | 623 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 6.0e-46 | 430 | 642 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| COG1472 | BglX | 5.0e-84 | 63 | 498 | 449 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| PRK15098 | PRK15098 | 7.0e-89 | 56 | 642 | 663 | + beta-D-glucoside glucohydrolase; Provisional | ||
| pfam00933 | Glyco_hydro_3 | 7.0e-90 | 64 | 393 | 334 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005575 | cellular_component |
| GO:0005618 | cell wall |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF07705.2 | 0 | 42 | 648 | 14 | 620 | Os02g0131400 [Oryza sativa Japonica Group] |
| GenBank | EEE56242.1 | 0 | 1 | 648 | 1 | 627 | hypothetical protein OsJ_05253 [Oryza sativa Japonica Group] |
| RefSeq | NP_001045791.1 | 0 | 1 | 648 | 1 | 648 | Os02g0131400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002451476.1 | 0 | 44 | 648 | 56 | 661 | hypothetical protein SORBIDRAFT_04g002570 [Sorghum bicolor] |
| RefSeq | XP_002453253.1 | 0 | 21 | 648 | 26 | 657 | hypothetical protein SORBIDRAFT_04g002560 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1j8v_A | 0 | 45 | 645 | 5 | 600 | QQ Chain q, Phob(E)-Sigma70(4)-(Rnap-Betha-Flap-Tip-Helix)-Dna Transcription Activation Sub-Complex |
| PDB | 1iex_A | 0 | 45 | 645 | 5 | 600 | QQ Chain q, Phob(E)-Sigma70(4)-(Rnap-Betha-Flap-Tip-Helix)-Dna Transcription Activation Sub-Complex |
| PDB | 1iew_A | 0 | 45 | 645 | 5 | 600 | QQ Chain q, Phob(E)-Sigma70(4)-(Rnap-Betha-Flap-Tip-Helix)-Dna Transcription Activation Sub-Complex |
| PDB | 1iev_A | 0 | 45 | 645 | 5 | 600 | QQ Chain q, Phob(E)-Sigma70(4)-(Rnap-Betha-Flap-Tip-Helix)-Dna Transcription Activation Sub-Complex |
| PDB | 1ieq_A | 0 | 45 | 645 | 5 | 600 | QQ Chain q, Phob(E)-Sigma70(4)-(Rnap-Betha-Flap-Tip-Helix)-Dna Transcription Activation Sub-Complex |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
