| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os02g28830.1 |
| Family | GT41 |
| Protein Properties | Length: 648 Molecular Weight: 72896.5 Isoelectric Point: 6.8325 |
| Chromosome | Chromosome/Scaffold: 2 Start: 17046461 End: 17052031 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT41 | 255 | 415 | 0 |
| AEGKHCRLRVGYVSSDFGNHPLSHLMGSVFGMHDRDNVEVFCYALSQNDGTEWRQRIQSEAEHFVDVSAMTSDMIARIINQDKIQILINLNGYTKGARNE IFALQPAPIQVSYMGFPGTTGAAYIDYLVTDEFVSPTCYSHIYSEKLVHLPHCYFVNDYKQ | |||
| GT41 | 426 | 628 | 0 |
| PHKRSDYGLPEDKFIFACFNQLYKMDPEIFDTWCNILKRVPNSALWLLRFPAAGETRVRAHAAARGVRPDQIIFTDVAMKNEHIRRSSLADLFLDTPLCN AHTTGTDILWAGLPMITLPLEKMATRVAGSLCLATGLGEEMIVSSMKEYEDRAVDLALNPAKLQALTNKLKEVRMTCPLFDTARWVRNLERAYYKMWNLY CSG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 648 Download |
| MGNALKDAGR VEEAINCYRS CLALQANHPQ ALTNLGNIYM EWNLISAAAS FYKAAISVTS 60 GLSSPLNNLA VIYKQQGNYA DAITCYTEVL RVDPTAADAL VNRGNTFKEI GRVNEAIQDY 120 IQAATIRPTM AEAHANLASA YKDSGHVETA IVSYKQALRL RPDFPEATCN LLHTLQCVCD 180 WENRNAMFRD VEEIIRKQIK MSVLPSVQPF HAIAYPIDPM LALEISCKYA AHCSLIASRF 240 GLPSFVHPPP VPVKAEGKHC RLRVGYVSSD FGNHPLSHLM GSVFGMHDRD NVEVFCYALS 300 QNDGTEWRQR IQSEAEHFVD VSAMTSDMIA RIINQDKIQI LINLNGYTKG ARNEIFALQP 360 APIQVSYMGF PGTTGAAYID YLVTDEFVSP TCYSHIYSEK LVHLPHCYFV NDYKQKNRDC 420 LDPVCPHKRS DYGLPEDKFI FACFNQLYKM DPEIFDTWCN ILKRVPNSAL WLLRFPAAGE 480 TRVRAHAAAR GVRPDQIIFT DVAMKNEHIR RSSLADLFLD TPLCNAHTTG TDILWAGLPM 540 ITLPLEKMAT RVAGSLCLAT GLGEEMIVSS MKEYEDRAVD LALNPAKLQA LTNKLKEVRM 600 TCPLFDTARW VRNLERAYYK MWNLYCSGRH REPFKVIEDD NEFPYDR* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00189 | TPR | 2.0e-17 | 30 | 129 | 100 | + Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | ||
| cd00189 | TPR | 3.0e-19 | 66 | 163 | 98 | + Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | ||
| pfam13844 | Glyco_transf_41 | 2.0e-72 | 429 | 622 | 194 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
| pfam13844 | Glyco_transf_41 | 8.0e-73 | 262 | 415 | 155 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
| COG3914 | Spy | 3.0e-105 | 67 | 625 | 568 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| GO:0005975 | carbohydrate metabolic process |
| GO:0006464 | cellular protein modification process |
| GO:0009058 | biosynthetic process |
| GO:0016740 | transferase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC73199.1 | 1e-20 | 1 | 171 | 152 | 322 | hypothetical protein OsI_07263 [Oryza sativa Indica Group] |
| GenBank | EEC73199.1 | 2e-20 | 1 | 176 | 186 | 361 | hypothetical protein OsI_07263 [Oryza sativa Indica Group] |
| GenBank | EEC73199.1 | 0 | 1 | 647 | 356 | 1004 | hypothetical protein OsI_07263 [Oryza sativa Indica Group] |
| GenBank | EEC73199.1 | 0.000000000000004 | 22 | 170 | 139 | 287 | hypothetical protein OsI_07263 [Oryza sativa Indica Group] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4gz6_D | 0 | 28 | 413 | 8 | 390 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 4gz6_D | 0 | 429 | 628 | 514 | 712 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 4gz6_C | 0 | 28 | 413 | 8 | 390 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 4gz6_C | 0 | 429 | 628 | 514 | 712 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO795247 | 461 | 188 | 648 | 0 |
| HO778725 | 450 | 199 | 648 | 0 |
| GO883237 | 344 | 101 | 444 | 0 |
| GT034150 | 327 | 295 | 621 | 0 |
| HO795247 | 54 | 136 | 189 | 1e-16 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
