| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os02g39960.1 |
| Family | GT47 |
| Protein Properties | Length: 483 Molecular Weight: 53438.1 Isoelectric Point: 10.2564 |
| Chromosome | Chromosome/Scaffold: 2 Start: 24163553 End: 24165653 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 139 | 433 | 0 |
| ERRFKIWTYREGEPPVAHIGPGTDIYSIEGQFMYEMDDPRSRFAARRPDDAHAFLLPISVCNLVHYVYRLNATGDLAPLRGLVADYVRVVAERYPYWNRS RGADHVIVSCHDWAPMVTSAHRQLYGNAIRVLCNANTSEGFRPRKDATLPEVNLADGVLRRPTAGLPPENRTTLAFFAGGRHGHIRESLLRHWLIGNKGG AAADGDGDGDMRVHEYLPAGEDYHAQMAAARFCLCPSGFEVASPRVVESVFAGCVPVIISEGYPPPFGDVLDWGKMSVAVPAARIPELRAILRRV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 483 Download |
| MEQSGRVAVP LTALALLAVV AAGVALPPAP SSGTGIQDGR GSEHSLRHVP DEPQKAPPTS 60 VHARPINKKV TRGKIEAGLA RSRAAIRRAA RATPPSDESI RRRGSASTVV AAAGDDDYVP 120 RGAIYRNARA FHRSYVEMER RFKIWTYREG EPPVAHIGPG TDIYSIEGQF MYEMDDPRSR 180 FAARRPDDAH AFLLPISVCN LVHYVYRLNA TGDLAPLRGL VADYVRVVAE RYPYWNRSRG 240 ADHVIVSCHD WAPMVTSAHR QLYGNAIRVL CNANTSEGFR PRKDATLPEV NLADGVLRRP 300 TAGLPPENRT TLAFFAGGRH GHIRESLLRH WLIGNKGGAA ADGDGDGDMR VHEYLPAGED 360 YHAQMAAARF CLCPSGFEVA SPRVVESVFA GCVPVIISEG YPPPFGDVLD WGKMSVAVPA 420 ARIPELRAIL RRVSERRYRV LRARVLQAQR HFVLHRPARR FDMIHMVLHS IWLRRLNVRL 480 PY* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 4.0e-69 | 138 | 429 | 309 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005623 | cell |
| GO:0008150 | biological_process |
| GO:0008152 | metabolic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD19700.1 | 0 | 138 | 482 | 1 | 345 | exostosin-like protein [Oryza sativa Japonica Group] |
| GenBank | EAY86665.1 | 0 | 1 | 482 | 1 | 482 | hypothetical protein OsI_08049 [Oryza sativa Indica Group] |
| RefSeq | NP_197526.4 | 0 | 59 | 481 | 11 | 408 | catalytic [Arabidopsis thaliana] |
| Swiss-Prot | Q3E9A4 | 0 | 11 | 481 | 35 | 466 | GLYT5_ARATH RecName: Full=Probable glycosyltransferase At5g20260 |
| RefSeq | XP_002454169.1 | 0 | 138 | 482 | 1 | 338 | hypothetical protein SORBIDRAFT_04g025885 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
