| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os02g40840.1 |
| Family | AA3 |
| Protein Properties | Length: 771 Molecular Weight: 82024.2 Isoelectric Point: 7.5702 |
| Chromosome | Chromosome/Scaffold: 2 Start: 24749442 End: 24754919 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 262 | 761 | 1.54143e-44 |
| ECDVAIVGSGCGGGVAAAVLAGAGHKVVVIEKGNYFTSRDYTSFEGPSINQLYESGGFVTTMNGGGLLLAGSTVGGGSAVNWSACLKTPEFVRREWAAAH GLPLFATPDYAAAMDKVFERLGVTSGCTEEGLQNKVLRKGCEKLGYKVDAVARNSSEGHYCGSCGFGCRTGDKRGTDTTWLVDAVGRGAVILTGCKAEKL VLERGGARGRRCVGVVARSTNPAITKTLEVRAKVTVSAAGSLLTPVLLQRSGLTNPHIGKNLHLHPTALAWGYFPDTMPDLKGKAYEGGIITSMHKVETS GAGAPHRAILETPMMAVAATGTQMPWLSGRDSKERMLRFARTVHIFSLVRDRGSGTVHGERRVAYRLDAADREDIRDGLRRALRVLVAAGAAEVGTHRSD GQRLRCEGLTEEALEEFLDGVTVVRGPQSRSETWGLFCSAHHMGSCRMGATAGDGAVDARGESWEAERLYVCDGSVLPTAVGVNPMITIQSVAYCLANGI | |||
| Full Sequence |
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| Protein Sequence Length: 771 Download |
| MGEEKSQQRR RQGHPLLRGG GAGKQAGRRY THGFSASQMV ALAALCGALA PSLPPDTRDD 60 DDDDAGGGRY GGAGASDAKA VRDFLLASAA DPPVPDEVAE LMTRMCLREA LALVRAVLWL 120 LGTRLGTLAL CGGRCVSWGR WPFVLTFAEM PVERREEALG RWSRVTVLPP LRAFFLVVKV 180 FCLYVFYSWI DESSENPHWR AIGYSPPTDE PPAEEHTEAT KRPLDDGVVE TINLTDASLP 240 SSLAEKGLAV TDDAARNVCR VECDVAIVGS GCGGGVAAAV LAGAGHKVVV IEKGNYFTSR 300 DYTSFEGPSI NQLYESGGFV TTMNGGGLLL AGSTVGGGSA VNWSACLKTP EFVRREWAAA 360 HGLPLFATPD YAAAMDKVFE RLGVTSGCTE EGLQNKVLRK GCEKLGYKVD AVARNSSEGH 420 YCGSCGFGCR TGDKRGTDTT WLVDAVGRGA VILTGCKAEK LVLERGGARG RRCVGVVARS 480 TNPAITKTLE VRAKVTVSAA GSLLTPVLLQ RSGLTNPHIG KNLHLHPTAL AWGYFPDTMP 540 DLKGKAYEGG IITSMHKVET SGAGAPHRAI LETPMMAVAA TGTQMPWLSG RDSKERMLRF 600 ARTVHIFSLV RDRGSGTVHG ERRVAYRLDA ADREDIRDGL RRALRVLVAA GAAEVGTHRS 660 DGQRLRCEGL TEEALEEFLD GVTVVRGPQS RSETWGLFCS AHHMGSCRMG ATAGDGAVDA 720 RGESWEAERL YVCDGSVLPT AVGVNPMITI QSVAYCLANG IADSLSAKTT * 780 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03970 | Rv0697 | 0.0005 | 662 | 754 | 94 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| pfam05199 | GMC_oxred_C | 4.0e-17 | 700 | 757 | 58 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 3.0e-22 | 332 | 762 | 470 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 6.0e-77 | 313 | 528 | 219 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003674 | molecular_function |
| GO:0003824 | catalytic activity |
| GO:0005488 | binding |
| GO:0005623 | cell |
| GO:0005783 | endoplasmic reticulum |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC73620.1 | 0 | 1 | 770 | 1 | 770 | hypothetical protein OsI_08118 [Oryza sativa Indica Group] |
| GenBank | EEE57396.1 | 0 | 1 | 741 | 1 | 695 | hypothetical protein OsJ_07570 [Oryza sativa Japonica Group] |
| GenBank | EEE57396.1 | 0 | 401 | 770 | 696 | 1066 | hypothetical protein OsJ_07570 [Oryza sativa Japonica Group] |
| RefSeq | NP_001047464.1 | 0 | 1 | 770 | 1 | 770 | Os02g0621800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002454190.1 | 0 | 11 | 765 | 6 | 770 | hypothetical protein SORBIDRAFT_04g026390 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t37_A | 0.0000004 | 262 | 740 | 17 | 499 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 3ljp_B | 0.0001 | 452 | 770 | 226 | 535 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3ljp_A | 0.0001 | 452 | 770 | 226 | 535 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 1kdg_B | 0.0002 | 258 | 531 | 3 | 288 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
| PDB | 1kdg_A | 0.0002 | 258 | 531 | 3 | 288 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO794753 | 629 | 140 | 765 | 0 |
| CB676542 | 250 | 328 | 577 | 0 |
| HO779224 | 451 | 233 | 680 | 0 |
| DV483887 | 272 | 190 | 456 | 0 |
| EE162194 | 273 | 192 | 462 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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