y
Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os02g50780.1 |
Family | GH47 |
Protein Properties | Length: 586 Molecular Weight: 66139 Isoelectric Point: 6.0815 |
Chromosome | Chromosome/Scaffold: 2 Start: 31003959 End: 31008703 |
Description | Glycosyl hydrolase family 47 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 55 | 489 | 0 |
MFYHAYDNYMTYAFPHDELKPLTKSFTDSLSELGNLNLEHLPNDYNGSALTLVESLSSLVVLGNLTEFERGVLWLSENLTFDVDARINLFECNIRLLGGL ISGHILAKEHSSHLKDGPYQDQLLHLAENLGSRFLPAFETPTGLPYAWINLKYGVMENETTETSTSGCGSLILEMGALSRLTGDSRYEAAALRALRKLWS MRSSLNLVGTTLDVLTGKWIEYSSGIGAGVDSFYEYLIKAYVLFGSEEYWDMFHSAYLAVQKYFRHGPWYHEADMRTGEATHWQLTSLQAFWPGLQTLLG DVAAANISHREFYNVWQRFGVLPERYLLDFGMLHPTEKYYPLRPEFAESTFYLYQATKDPWYLEVGEAIIGSLNYYTKVDGGFASVRDVSTMKLEDHQHS FFLSETCKYLFLLYDDSFLRNQNYIFTTEGHPLPI |
Full Sequence |
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Protein Sequence Length: 586 Download |
MRPPPRPRRP VPARLVAAAV LLSALAGGAA AGAAIAGDGY GRGRRLYMRN KVLEMFYHAY 60 DNYMTYAFPH DELKPLTKSF TDSLSELGNL NLEHLPNDYN GSALTLVESL SSLVVLGNLT 120 EFERGVLWLS ENLTFDVDAR INLFECNIRL LGGLISGHIL AKEHSSHLKD GPYQDQLLHL 180 AENLGSRFLP AFETPTGLPY AWINLKYGVM ENETTETSTS GCGSLILEMG ALSRLTGDSR 240 YEAAALRALR KLWSMRSSLN LVGTTLDVLT GKWIEYSSGI GAGVDSFYEY LIKAYVLFGS 300 EEYWDMFHSA YLAVQKYFRH GPWYHEADMR TGEATHWQLT SLQAFWPGLQ TLLGDVAAAN 360 ISHREFYNVW QRFGVLPERY LLDFGMLHPT EKYYPLRPEF AESTFYLYQA TKDPWYLEVG 420 EAIIGSLNYY TKVDGGFASV RDVSTMKLED HQHSFFLSET CKYLFLLYDD SFLRNQNYIF 480 TTEGHPLPIR STWHEIIPTT HVPSNWTFVK DDSQPFRVSA LSSQVCPETI FRQSVGSPWE 540 SACHVPDVLP THRCRTDDDC GVEAVSCRRR TCSMAGYCGL WLGVY* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03897 | lanti_2_LanM | 0.002 | 153 | 310 | 175 | + type 2 lantibiotic biosynthesis protein LanM. Members of this family are known generally as LanM, a multifunctional enzyme of lantibiotic biosynthesis. This catalysis by LanM distinguishes the type 2 lantibiotics, such as mersacidin, cinnamycin, and lichenicidin, from LanBC-produced type 1 lantibiotics such as nisin and subtilin. The N-terminal domain contains regions associated with Ser and Thr dehydration. The C-terminal region contains a pfam05147 domain, which catalyzes the formation of the lanthionine bridge [Cellular processes, Toxin production and resistance]. | ||
PTZ00470 | PTZ00470 | 7.0e-63 | 49 | 489 | 479 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 1.0e-139 | 55 | 489 | 472 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005488 | binding |
GO:0005509 | calcium ion binding |
GO:0005623 | cell |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC73977.1 | 0 | 38 | 585 | 38 | 585 | hypothetical protein OsI_08885 [Oryza sativa Indica Group] |
RefSeq | NP_001048080.1 | 0 | 38 | 585 | 38 | 585 | Os02g0741300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002280345.1 | 0 | 43 | 584 | 30 | 573 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002454305.1 | 0 | 35 | 585 | 29 | 573 | hypothetical protein SORBIDRAFT_04g028330 [Sorghum bicolor] |
RefSeq | XP_002511454.1 | 0 | 38 | 584 | 29 | 575 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nxc_A | 0 | 49 | 489 | 21 | 465 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1x9d_A | 0 | 47 | 489 | 87 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1fmi_A | 0 | 47 | 489 | 9 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo3_A | 0 | 47 | 489 | 9 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo2_A | 0 | 47 | 489 | 9 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |