| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os02g51070.1 |
| Family | GT5 |
| Protein Properties | Length: 695 Molecular Weight: 75623.4 Isoelectric Point: 6.4772 |
| Chromosome | Chromosome/Scaffold: 2 Start: 31232888 End: 31238210 |
| Description | starch synthase 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT5 | 204 | 687 | 0 |
| NVIVVASECSPFCKTGGLGDVVGALPKALARRGHRVMVVIPRYGEYAEAKDLGVRKRYRVAGQDSEVSYFHAFIDGVDFVFLEAPPFRHRHNDIYGGERF DVLKRMILFCKAAVEVPWFAPCGGSIYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSVLVIHNIAHQGRGPVDDFATMDLPEHYIDHFRLYDPV GGEHSNVFAAGLKMADRAVTVSHGYLWEIKTMDGGWGLHEIINHNDWKLQGIVNGIDMAEWNPEVDEHLQSDGYANYTFETLDTGKKQCKEALQRQLGLQ VRDDVPLIGFIGRLDHQKGVDIIGDAMPWIAGQDVQVVMLGTGRPDLEEMLRRFESEHNDKVRGWVGFSVQLAHRITAGADVLLMPSRFEPCGLNQLYAM AYGTVPVVHAVGGLRDTVAPFDPFADTGLGWTFDRAEANRMIDALGHCLNTYRNYKESWRGLQARGMAQDLSWDHAAELYEDVL | |||
| Full Sequence |
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| Protein Sequence Length: 695 Download |
| MSGAIASSPA ATLFLAGSSS SSPRRRRSRV SGVWWHLYGG TGLRLHWERR GLVRDGAVVC 60 SASAAGGEDG VAKAKTKSAG SSKAVAVQGS TAKADHVEDS VSSPKYVKPA VAKQNGEVVS 120 RATKSDAPVS KPKVDPSVPA SKAEADGNAQ AVESKAALDK KEDVGVAEPL EAKADAGGDA 180 GAVSSADDSE NKESGPLAGP NVMNVIVVAS ECSPFCKTGG LGDVVGALPK ALARRGHRVM 240 VVIPRYGEYA EAKDLGVRKR YRVAGQDSEV SYFHAFIDGV DFVFLEAPPF RHRHNDIYGG 300 ERFDVLKRMI LFCKAAVEVP WFAPCGGSIY GDGNLVFIAN DWHTALLPVY LKAYYRDNGL 360 MQYTRSVLVI HNIAHQGRGP VDDFATMDLP EHYIDHFRLY DPVGGEHSNV FAAGLKMADR 420 AVTVSHGYLW EIKTMDGGWG LHEIINHNDW KLQGIVNGID MAEWNPEVDE HLQSDGYANY 480 TFETLDTGKK QCKEALQRQL GLQVRDDVPL IGFIGRLDHQ KGVDIIGDAM PWIAGQDVQV 540 VMLGTGRPDL EEMLRRFESE HNDKVRGWVG FSVQLAHRIT AGADVLLMPS RFEPCGLNQL 600 YAMAYGTVPV VHAVGGLRDT VAPFDPFADT GLGWTFDRAE ANRMIDALGH CLNTYRNYKE 660 SWRGLQARGM AQDLSWDHAA ELYEDVLVKA KYQW* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 9.0e-84 | 203 | 683 | 506 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 2.0e-132 | 203 | 685 | 491 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 9.0e-167 | 203 | 687 | 501 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 0 | 203 | 690 | 494 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 204 | 687 | 493 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0006091 | generation of precursor metabolites and energy |
| GO:0008152 | metabolic process |
| GO:0009058 | biosynthetic process |
| GO:0009536 | plastid |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK81729.1 | 0 | 1 | 694 | 1 | 694 | AF395537_1 soluble starch synthase II-2 [Oryza sativa] |
| GenBank | ACY56195.1 | 0 | 1 | 694 | 1 | 694 | soluble starch synthase II-2 [Oryza sativa Indica Group] |
| GenBank | EEC73999.1 | 0 | 1 | 694 | 1 | 694 | hypothetical protein OsI_08916 [Oryza sativa Indica Group] |
| RefSeq | NP_001048104.1 | 0 | 19 | 694 | 2 | 677 | Os02g0744700 [Oryza sativa (japonica cultivar-group)] |
| Swiss-Prot | Q6Z2T8 | 0 | 1 | 694 | 1 | 694 | SSY22_ORYSJ RecName: Full=Soluble starch synthase 2-2, chloroplastic/amyloplastic; AltName: Full=Soluble starch synthase II-2; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 203 | 688 | 10 | 509 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 3vue_A | 0 | 203 | 688 | 10 | 509 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 203 | 691 | 1 | 477 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 203 | 693 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 203 | 693 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO777841 | 319 | 377 | 695 | 0 |
| HO777841 | 190 | 196 | 385 | 0 |
| HO781048 | 394 | 302 | 695 | 0 |
| HO445868 | 438 | 258 | 695 | 0 |
| HO781048 | 38 | 265 | 302 | 0.81 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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