| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os02g51620.1 |
| Family | GH3 |
| Protein Properties | Length: 781 Molecular Weight: 84306.5 Isoelectric Point: 6.7817 |
| Chromosome | Chromosome/Scaffold: 2 Start: 31609611 End: 31614169 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 80 | 332 | 0 |
| VDRLGVPAYKWWSEALHGVSNAGRGIHLDGPLRAATSFPQVILTAASFNPHLWYRIGQVIGTEARAVYNNGQAEGLTFWAPNINVFRDPRWGRGQETPGE DPTVTGKYAAVFVRGVQGYALAGAINSTDLEASACCKHFTAYDLENWKGVTRYAFDAKVTAQDLADTYNPPFRSCVEDGGASGIMCSYNRVNGVPTCADY NLLSKTARGDWRFYGYITSDCDAVSIIHDVQGYAKTAEDAVADVLKAGMDVNC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 781 Download |
| MGRRARALLH APAPLLLLLA LAAAAAAVAV ASGPPFSCGA PSSAAFCNPR LPIEQRADDL 60 VSRLTLEEKI SQLGDQSPAV DRLGVPAYKW WSEALHGVSN AGRGIHLDGP LRAATSFPQV 120 ILTAASFNPH LWYRIGQVIG TEARAVYNNG QAEGLTFWAP NINVFRDPRW GRGQETPGED 180 PTVTGKYAAV FVRGVQGYAL AGAINSTDLE ASACCKHFTA YDLENWKGVT RYAFDAKVTA 240 QDLADTYNPP FRSCVEDGGA SGIMCSYNRV NGVPTCADYN LLSKTARGDW RFYGYITSDC 300 DAVSIIHDVQ GYAKTAEDAV ADVLKAGMDV NCGSYVQEHG LSAIQQGKIT EQDINRALHN 360 LFAVRMRLGL FNGNPKYNRY GNIGPDQVCT QEHQNLALEA AQHGVVLLKN DANALPLSKS 420 QVSSIAVIGH NANDATRLLG NYFGPPCISV TPLQVLQGYV KDTRFLAGCN SAACNVSSIG 480 EAAQLASSVD YVVLFMGLDQ DQEREEVDRL ELSLPGMQEN LINTVANAAK KPVILVLLCG 540 GPVDVTFAKY NPKIGAILWA GYPGEAGGIA IAQVLFGEHN PGGRLPVTWY PKEFTSVPMT 600 DMRMRADPST GYPGRTYRFY RGNTVYKFGY GLSYSKYSHH FVANGTKLPS LSSIDGLKAM 660 ATAAAGTVSY DVEEIGPETC DKLKFPALVR VQNHGPMDGR HPVLLFLRWP NGAADGGRPA 720 SQLIGFQSLH LKSMQTVHVE FEVSPCKHFS RATEDGKKVI DHGSHFMMVG DDEFEMSFTP 780 * 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 2.0e-51 | 68 | 434 | 374 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam01915 | Glyco_hydro_3_C | 8.0e-59 | 405 | 635 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| pfam00933 | Glyco_hydro_3 | 9.0e-61 | 65 | 357 | 323 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 1.0e-74 | 40 | 745 | 795 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 32 | 777 | 757 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005575 | cellular_component |
| GO:0005576 | extracellular region |
| GO:0005618 | cell wall |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK38482.1 | 0 | 30 | 778 | 28 | 775 | beta-D-xylosidase [Hordeum vulgare] |
| GenBank | EEC74020.1 | 0 | 1 | 780 | 1 | 774 | hypothetical protein OsI_08964 [Oryza sativa Indica Group] |
| RefSeq | NP_001048140.1 | 0 | 1 | 780 | 1 | 780 | Os02g0752200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130324.1 | 0 | 2 | 778 | 3 | 778 | hypothetical protein LOC100191418 [Zea mays] |
| RefSeq | XP_002452540.1 | 0 | 31 | 778 | 35 | 782 | hypothetical protein SORBIDRAFT_04g027700 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 137 | 770 | 106 | 722 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 3u48_A | 0 | 137 | 770 | 106 | 722 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 3u4a_B | 0 | 137 | 777 | 106 | 729 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 3u4a_A | 0 | 137 | 777 | 106 | 729 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 2x41_A | 3.00004e-41 | 55 | 731 | 2 | 661 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
