| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os02g53200.2 |
| Family | CBM43 |
| Protein Properties | Length: 489 Molecular Weight: 50888.8 Isoelectric Point: 8.2906 |
| Chromosome | Chromosome/Scaffold: 2 Start: 32566914 End: 32570045 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 400 | 483 | 5.3e-33 |
| WCVANAMAGEERLQKALDYACGPGGADCKAIQPGAACFEPNTMVAHASYAFNDYYQRKGRTIGTCDFAGAAYVVNQAPKMGKCE | |||
| GH17 | 29 | 350 | 0 |
| VGINYGRVANDLPNPAAVVQLMKQQGIAQVKLYDTEPTVLRALANTGIKVVVALPNEQLLAAASRPSYALAWVRRNVAAYYPATQIQGIAVGNEVFASAK NLTAQLVPAMTNVHAALARLSLDKPVKVSSPIALTALAGSYPPSAGVFREDLAQAVMKPMLDFLAQTGSYLMVNAYPFFAYSGNADVISLDYALFRPNAG VLDSGSGLKYYSLLDAQLDAVFTAVSKLGNYNAVRVVVSETGWPSKGDAKETGAAAANAAAYNGNLVRRVLSGNAGTPRRPDADMDVYLFALFNENQKPG PTSERNYGVFYPNQQKVYDVEF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 489 Download |
| MALPGRLRAL ILAVALPLLF LSASEAGTVG INYGRVANDL PNPAAVVQLM KQQGIAQVKL 60 YDTEPTVLRA LANTGIKVVV ALPNEQLLAA ASRPSYALAW VRRNVAAYYP ATQIQGIAVG 120 NEVFASAKNL TAQLVPAMTN VHAALARLSL DKPVKVSSPI ALTALAGSYP PSAGVFREDL 180 AQAVMKPMLD FLAQTGSYLM VNAYPFFAYS GNADVISLDY ALFRPNAGVL DSGSGLKYYS 240 LLDAQLDAVF TAVSKLGNYN AVRVVVSETG WPSKGDAKET GAAAANAAAY NGNLVRRVLS 300 GNAGTPRRPD ADMDVYLFAL FNENQKPGPT SERNYGVFYP NQQKVYDVEF VLGGNSAGGG 360 GSSGKDNGGL GWQDNGGVNA GNAPAGAGGG VKATSTGEAW CVANAMAGEE RLQKALDYAC 420 GPGGADCKAI QPGAACFEPN TMVAHASYAF NDYYQRKGRT IGTCDFAGAA YVVNQAPKMG 480 KCELPSTV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0001 | 24 | 341 | 331 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-22 | 400 | 471 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-38 | 400 | 482 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-103 | 29 | 350 | 322 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005623 | cell |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF88240.1 | 0 | 19 | 488 | 19 | 481 | unknown [Zea mays] |
| GenBank | EAZ24771.1 | 0 | 73 | 477 | 38 | 442 | hypothetical protein OsJ_08544 [Oryza sativa Japonica Group] |
| RefSeq | NP_001048260.1 | 0 | 1 | 488 | 1 | 488 | Os02g0771700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001136613.1 | 0 | 19 | 488 | 19 | 481 | hypothetical protein LOC100216736 [Zea mays] |
| RefSeq | XP_002454630.1 | 0 | 9 | 488 | 10 | 491 | hypothetical protein SORBIDRAFT_04g034530 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 29 | 350 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 29 | 350 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 29 | 350 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_D | 0 | 29 | 350 | 2 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_C | 0 | 29 | 350 | 2 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
