| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os02g58480.1 |
| Family | GT4 |
| Protein Properties | Length: 847 Molecular Weight: 96153 Isoelectric Point: 6.3464 |
| Chromosome | Chromosome/Scaffold: 2 Start: 35754946 End: 35761781 |
| Description | sucrose synthase 6 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 569 | 734 | 0 |
| DRSKPIIFSMARLDKIKNITGLVEWYGQNKRLRDLVNLVIVGGLLDPSQSKDREEIEEINKMHSLINKYQLVGQIRWIKGQTDRVRNGELYRCIADTKGA FVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDEVSGFHINPLNGKEASDKIADFFQKCKE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 847 Download |
| MAVGLRRSDS IADMMPEALR QSRYQMKRCF QRYVSQGKRL MKRQQLLDEL DKSVDDKADK 60 DQLLQGFLGY VISSTQEAAV LPPFVAFAVR MNPGIWEFVK VHSANLSVEQ MTPSDYLKNK 120 EALVDDKWGA YDDDSQLEVD FGALDLSTPH LTLPSSIGKG AHLVSRFMSS KLTDNKKPLL 180 DYLLALSHRG DKLMINDILD TVDKLQTALL LAEVYVAGLH PDTNYSEFEQ KFQEWGLEKG 240 WGDTAETCKE TLSSLSEVLQ APDPINMEKF FSTVPCVFTV VIFSIHGYFG QEKVLGMPDT 300 GGQVVYILDQ VRALEDELLQ RIKQQGLNAT PKILVLTRLI PEAKGTKCNV ELEPIENTKH 360 SNILRVPFKT EDGKVLPQWV SRFDIYPYLE RYAQDSSVKI LEILEGKPDL VIGNYTDGNL 420 VASLLTSKLG VTQGTIAHAL EKTKYEDSDI KWRELDHKYH FSCQFTADMI AMNTSDFIIA 480 STYQEIAGSK EKPGQYESHY AFTMPGLCRY ATGINVFDPK FNIAAPGADQ SVYFPFTQKQ 540 KRLTDLHPQI EELLYSKEDN NEHIGHLADR SKPIIFSMAR LDKIKNITGL VEWYGQNKRL 600 RDLVNLVIVG GLLDPSQSKD REEIEEINKM HSLINKYQLV GQIRWIKGQT DRVRNGELYR 660 CIADTKGAFV QPALYEAFGL TVIEAMNCGL PTFATNQGGP AEIIVDEVSG FHINPLNGKE 720 ASDKIADFFQ KCKEDLIYWS KMSTAGLQRI YECYTWQIYA TKVLNMASIY GFWRTLDKEE 780 RQAKQHYLHM FYNLQFRKLA KNVPTLGEQP AQPTESAEPN RIIPRPKERQ VCPFLRNLLK 840 KETGNN* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02472 | sucr_P_syn_N | 1.0e-59 | 280 | 767 | 496 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
| cd03800 | GT1_Sucrose_synthase | 7.0e-115 | 280 | 764 | 488 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
| PLN00142 | PLN00142 | 0 | 1 | 814 | 817 | + sucrose synthase | ||
| TIGR02470 | sucr_synth | 0 | 23 | 804 | 785 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| pfam00862 | Sucrose_synth | 0 | 7 | 556 | 553 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0005975 | carbohydrate metabolic process |
| GO:0005985 | sucrose metabolic process |
| GO:0008150 | biological_process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAE03896.2 | 0 | 3 | 844 | 5 | 848 | OSJNBb0026I12.4 [Oryza sativa (japonica cultivar-group)] |
| EMBL | CAH66603.1 | 0 | 3 | 844 | 5 | 848 | H0211A12.6 [Oryza sativa (indica cultivar-group)] |
| GenBank | EEC76883.1 | 0 | 3 | 844 | 5 | 848 | hypothetical protein OsI_15088 [Oryza sativa Indica Group] |
| GenBank | EEE58112.1 | 0 | 1 | 752 | 1 | 746 | hypothetical protein OsJ_08997 [Oryza sativa Japonica Group] |
| RefSeq | NP_001048620.1 | 0 | 1 | 846 | 1 | 846 | Os02g0831500 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s29_H | 0 | 5 | 804 | 8 | 803 | A Chain A, Crystal Structure Of The Tartronic Semialdehyde Reductase From Salmonella Typhimurium Lt2 |
| PDB | 3s29_G | 0 | 5 | 804 | 8 | 803 | A Chain A, Crystal Structure Of The Tartronic Semialdehyde Reductase From Salmonella Typhimurium Lt2 |
| PDB | 3s29_F | 0 | 5 | 804 | 8 | 803 | A Chain A, Crystal Structure Of The Tartronic Semialdehyde Reductase From Salmonella Typhimurium Lt2 |
| PDB | 3s29_E | 0 | 5 | 804 | 8 | 803 | A Chain A, Crystal Structure Of The Tartronic Semialdehyde Reductase From Salmonella Typhimurium Lt2 |
| PDB | 3s29_D | 0 | 5 | 804 | 8 | 803 | A Chain A, Crystal Structure Of The Tartronic Semialdehyde Reductase From Salmonella Typhimurium Lt2 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| galactose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| sucrose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| UDP-glucose biosynthesis (from sucrose) | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794519 | 803 | 5 | 804 | 0 |
| BU103683 | 833 | 5 | 830 | 0 |
| CX109054 | 603 | 102 | 701 | 0 |
| FG227316 | 455 | 277 | 731 | 0 |
| GO872338 | 325 | 505 | 829 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
